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Showing results 181 to 240 of 273

Issue Date	Title / Author(s) / Citation	File
2012-10	Draft genome sequence of Weissella koreensis KCTC 3621T Lee, Je Hee; Bae, Jin-Woo; Chun, Jongsik Journal of Bacteriology, Vol.194 No.20, pp.5711-5712	DOI
2012-10	Genome sequence of pectin-degrading Alishewanella aestuarii strain B11T, isolated from tidal flat sediment Jung, Jaejoon; Choi, Sungjong; Chun, Jongsik; Park, Woojun Journal of Bacteriology, Vol.194 No.19, pp.5476-5476	DOI
2012-11	A defect in iron uptake enhances the susceptibility of Cryptococcus neoformans to azole antifungal drugs Kim, Jeongmi; Cho, Yong-Joon; Do, Eunsoo; Choi, Jaehyuk; Hu, Guanggan; Cadieux, Brigitte; Chun, Jongsik; Lee, Younghoon; Kronstad, James W.; Jung, Won Hee Fungal Genetics and Biology, Vol.49 No.11, pp.955-966	DOI
2012-12	Draft genome sequencing of Bacillus sp. strain M2-6, isolated from the roots of Korean ginseng, Panax ginseng C. A. Meyer, after high-hydrostatic-pressure processing Kim, Chong-Tai; Kim, Bong-Soo; Kim, Min-Ji; Park, Bang Heon; Kwon, Sujin; Maeng, Hack Young; Kwak, Jangyul; Chun, Jongsik; Cho, Yong-Jin; Kim, Namsoo; Kim, Chul-Jin; Maeng, Jin-Soo Journal of Bacteriology, Vol.194 No.24, pp.7003-7004	DOI
2012-12	Draft genome sequence of Escherichia coli AI27, a porcine isolate belonging to phylogenetic group B1 Lee, Kihyun; Yi, Hana; Cho, Yong-Joon; Jang, Jeonghwan; Hur, Hor-Gil; Chun, Jongsik Journal of Bacteriology, Vol.194 No.23, pp.6640-6641	DOI
2013	Genome sequence of the moderately halophilic bacterium Salinicoccus carnicancri type strain CrmT (= DSM 23852T) Hyun, Dong-Wook; Whon, Tae Woong; Cho, Yong-Joon; Chun, Jongsik; Kim, Min-Soo; Jung, Mi-Ja; Shin, Na-Ri; Kim, Joon-Yong; Kim, Pil Soo; Yun, Ji-Hyun; Lee, Jina; Oh, Sei Joon; Bae, Jin-Woo Standards in Genomic Sciences, Vol.8 No.2, pp.255-263	view file DOI
2013-02	Production of hydrogen and volatile fatty acid by Enterobacter sp. T4384 using organic waste materials Kim, Byung-Chun; Deshpande, Tushar R.; Chun, Jongsik; Yi, Sung Chul; Kim, Hyunook; Um, Youngsoon; Sang, Byoung-In Journal of Microbiology and Biotechnology, Vol.23 No.2, pp.189-194	DOI
2013-06	Current status and future promise of the human microbiome Kim, Bong-Soo; Jeon, Yoon-Seong; Chun, Jongsik Pediatric Gastroenterology, Hepatology & Nutrition, Vol.16 No.2, pp.71-79	DOI
2013-09	Analytical Tools and Databases for Metagenomics in the Next-Generation Sequencing Era 김민철; 이기현; 윤석환; 김봉수; 천종식; 이하나 Genomics & Informatics, Vol.11 No.3, pp.102-113	view file DOI
2013-11	An eco-friendly treatment of tannery wastewater using bioaugmentation with a novel microbial consortium Kim, In-Soo; Ekpeghere, Kaluibe; Ha, Shin-Young; Kim, Soo-Hyeon; Kim, Bong-Soo; Song, Bongkeun; Chun, Jongsik; Chang, Jae-Soo; Kim, Hong-Gi; Koh, Sung-Cheol Journal of Environmental Science and Health - Part A Toxic/Hazardous Substances and Environmental Engineering, Vol.48 No.13, pp.1732-1739	DOI
2013-11	The Genome Sequence of 'Mycobacterium massiliense' Strain CIP 108297 Suggests the Independent Taxonomic Status of the Mycobacterium abscessus Complex at the Subspecies Level Cho, Yong-Joon; Yi, Hana; Chun, Jongsik; Cho, Sang-Nae; Daley, Charles L.; Koh, Won-Jung; Shin, Sung Jae PLoS ONE, Vol.8 No.11	view file DOI
2013-11	Identification of household bacterial community and analysis of species shared with human microbiome Jeon, Yoon-Seong; Chun, Jongsik; Kim, Bong-Soo Current Microbiology, Vol.67 No.5, pp.557-563	DOI
2013-12	Transcriptomic analysis of genes modulated by cyclo(l-phenylalanine-l-proline) in vibrio vulnificus Kim, In Hwang; Son, Jee-Soo; Wen, Yancheng; Jeong, Sang-Min; Min, Ga-Young; Park, Na-Young; Lee, Keun-Woo; Cho, Yong-Joon; Chun, Jongsik; Kim, Kun-Soo Journal of Microbiology and Biotechnology, Vol.23 No.12, pp.1791-1801	DOI
2013-12	Flavobacterium limnosediminis sp nov., isolated from sediment of a freshwater lake Lee, Kihyun; Park, Sang-Cheol; Yi, Hana; Chun, Jongsik International Journal of Systematic and Evolutionary Microbiology, Vol.63, pp.4784-4789	DOI
2013-12	Fretibacter rubidus gen. nov., sp. nov., isolated from seawater Cho, Yong-Joon; Yi, Hana; Seo, Boram; Cho, Kyeung Hee; Chun, Jongsik International Journal of Systematic and Evolutionary Microbiology, Vol.63 No.PART 12, pp.4633-4638	DOI
2014	Clonality and resistome analysis of KPC-producing klebsiella pneumoniae strain isolated in Korea using whole genome sequencing Lee, Yangsoon; Kim, Bong-Soo; Chun, Jongsik; Yong, Ji Hyun; Lee, Yeong Seon; Yoo, Jung Sik; Yong, Dongeun; Hong, Seong Geun; D'Souza, Roshan; Thomson, Kenneth S.; Lee, Kyungwon; Chong, Yunsop BioMed Research International, Vol.2014, p. 352862	view file DOI
2014	Genome sequence of the chromate-resistant bacterium Leucobacter salsicius type strain M1-8T Yun, Ji-Hyun; Cho, Yong-Joon; Chun, Jongsik; Hyun, Dong-Wook; Bae, Jin-Woo Standards in Genomic Sciences, Vol.9 No.3, pp.495-504	view file DOI
2014-02	Development of Optimized Bioinformatic Analysis Systems for Next Generation Sequencing Data from Metagenome 전윤성	view file
2014-02	A vanillin derivative causes mitochondrial dysfunction and triggers oxidative stress in Cryptococcus neoformans Kim, Jin Hyo; Lee, Han-Ok; Cho, Yong-Joon; Kim, Jeongmi; Chun, Jongsik; Choi, Jaehyuk; Lee, Younghoon; Jung, Won Hee PLoS ONE, Vol.9 No.2, p. e0089122	view file DOI
2014-02	Integrating genomics into the taxonomy and systematics of the Bacteria and Archaea Chun, Jongsik; Rainey, Fred A. International Journal of Systematic and Evolutionary Microbiology, Vol.64 No.PART 2, pp.316-324	DOI
2014-02	Towards a taxonomic coherence between average nucleotide identity and 16S rRNA gene sequence similarity for species demarcation of prokaryotes Kim, Mincheol; Oh, Hyun-Seok; Park, Sang-Cheol; Chun, Jongsik International Journal of Systematic and Evolutionary Microbiology, Vol.64 No.PART 2, pp.346-351	DOI
2014-02	EzEditor: a versatile sequence alignment editor for both rRNA- and protein-coding genes Jeon, Yoon-Seong; Lee, Kihyun; Park, Sang-Cheol; Kim, Bong-Soo; Cho, Yong-Joon; Ha, Sung-Min; Chun, Jongsik International Journal of Systematic and Evolutionary Microbiology, Vol.64, pp.689-691	DOI
2014-03	Genomic insights into the taxonomic status of the three subspecies of Bacillus subtilis Yi, Hana; Chun, Jongsik; Cha, Chang-Jun Systematic and Applied Microbiology, Vol.37 No.2, pp.95-99	DOI
2014-08	Spatial Scaling Effects on Soil Bacterial Communities in Malaysian Tropical Forests Tripathi, Binu M.; Lee-Cruz, Larisa; Kim, Mincheol; Singh, Dharmesh; Go, Rusea; Shukor, Noraini A. A.; Husni, M. H. A.; Chun, Jongsik; Adams, Jonathan M. Microbial Ecology, Vol.68 No.2, pp.247-258	DOI
2014-08	Bacterial community structure and soil properties of a subarctic tundra soil in Council, Alaska Kim, Hye Min; Jung, Ji Young; Yergeau, Etienne; Hwang, Chung Yeon; Hinzman, Larry; Nam, Sungjin; Hong, Soon Gyu; Kim, Ok-Sun; Chun, Jongsik; Lee, Yoo Kyung FEMS Microbiology Ecology, Vol.89 No.2, pp.465-475	DOI
2014-08	Genomic Encyclopedia of Bacteria and Archaea: Sequencing a Myriad of Type Strains Kyrpides, Nikos C.; Hugenholtz, Philip; Eisen, Jonathan A.; Woyke, Tanja; Goeker, Markus; Parker, Charles T.; Amann, Rudolf; Beck, Brian J.; Chain, Patrick S. G.; Chun, Jongsik; Colwell, Rita R.; Danchin, Antoine; Dawyndt, Peter; Dedeurwaerdere, Tom; DeLong, Edward F.; Detter, John C.; De Vos, Paul; Donohue, Timothy J.; Dong, Xiu-Zhu; Ehrlich, Dusko S.; Fraser, Claire; Gibbs, Richard; Gilbert, Jack; Gilna, Paul; Glockner, Frank Oliver; Jansson, Janet K.; Keasling, Jay D.; Knight, Rob; Labeda, David; Lapidus, Alla; Lee, Jung-Sook; Li, Wen-Jun; Ma, Juncai; Markowitz, Victor; Moore, Edward R. B.; Morrison, Mark; Meyer, Folker; Nelson, Karen E.; Ohkuma, Moriya; Ouzounis, Christos A.; Pace, Norman; Parkhill, Julian; Qin, Nan; Rossello-Mora, Ramon; Sikorski, Johannes; Smith, David; Sogin, Mitch; Stevens, Rick; Stingl, Uli; Suzuki, Ken-ichiro; Taylor, Dorothea; Tiedje, Jim M.; Tindall, Brian; Wagner, Michael; Weinstock, George; Weissenbach, Jean; White, Owen; Wang, Jun; Zhang, Lixin; Zhou, Yu-Guang; Field, Dawn; Whitman, William B.; Garrity, George M.; Klenk, Hans-Peter PLoS Biology, Vol.12 No.8, p. e1001920	view file DOI
2014-09	Lacinutrix jangbogonensis sp. nov., a psychrophilic bacterium isolated from Antarctic marine sediment and emended description of the genus Lacinutrix Lee, Yung Mi; Hwang, Chung Yeon; Lee, Inae; Jung, You-Jung; Cho, Yirang; Baek, Kiwoon; Hong, Soon Gyu; Kim, Ji-Hee; Chun, Jongsik; Lee, Hong Kum Antonie van Leeuwenhoek, International Journal of General and Molecular Microbiology, Vol.106 No.3, pp.527-533	DOI
2014-11	Profiling bacterial community in upper respiratory tracts Yi, Hana; Yong, Dongeun; Lee, Kyungwon; Cho, Yong-Joon; Chun, Jongsik BMC Infectious Diseases, Vol.14, p. 583	view file DOI
2015-01	Improved pipeline for reducing erroneous identification by 16S rRNA sequences using the Illumina MiSeq platform Jeon, Yoon-Seong; Park, Sang-Cheol; Lim, Jeongmin; Chun, Jongsik; Kim, Bong-Soo The Journal of Microbiology, Vol.53 No.1, pp.60-69	DOI
2015-02	Burkholderia monticola sp nova, isolated from mountain soil Baek, Inwoo; Seo, Boram; Lee, Imchang; Yi, Hana; Chun, Jongsik International Journal of Systematic and Evolutionary Microbiology, Vol.65 No.2, pp.504-509	DOI
2015-02	Neisseria weaveri Andersen et al. 1993 is a later heterotypic synonym of Neisseria weaveri Holmes et al. 1993 Yi, Hana; Chun, Jongsik International Journal of Systematic and Evolutionary Microbiology, Vol.65, pp.463-464	DOI
2015-03	Large-scale evaluation of experimentally determined DNA G plus C contents with whole genome sequences of prokaryotes Kim, Mincheol; Park, Sang-Cheol; Baek, Inwoo; Chun, Jongsik Systematic and Applied Microbiology, Vol.38 No.2, pp.79-83	DOI
2015-03	Burkholderia megalochromosomata sp nov., isolated from grassland soil Baek, Inwoo; Seo, Boram; Lee, Imchang; Lee, Kihyun; Park, Sang-Cheol; Yi, Hana; Chun, Jongsik International Journal of Systematic and Evolutionary Microbiology, Vol.65, pp.959-964	DOI
2015-05	Deep-sea hydrothermal vent bacteria related to human pathogenic Vibrio species Hasan, Nur A.; Grim, Christopher J.; Lipp, Erin K.; Rivera, Irma N. G.; Chun, Jongsik; Haley, Bradd J.; Taviani, Elisa; Choi, Seon Young; Hoq, Mozammel; Munk, A. Christine; Brettin, Thomas S.; Bruce, David; Challacombe, Jean F.; Detter, J. Chris; Han, Cliff S.; Eisen, Jonathan A.; Huq, Anwar; Colwell, Rita R. Proceedings of the National Academy of Sciences of the United States of America, Vol.112 No.21, pp.E2813-E2819	DOI
2015-05	Metagenomic Insights into the Bioaerosols in the Indoor and Outdoor Environments of Childcare Facilities Shin, Su-Kyoung; Kim, Jinman; Ha, Sung-min; Oh, Hyun-Seok; Chun, Jongsik; Sohn, Jongryeul; Yi, Hana PLoS ONE, Vol.10 No.5, p. e0126960	view file DOI
2015-07	Pyrosequencing Analysis of Subgingival Microbiota in Distinct Periodontal Conditions Park, O. -J.; Yi, H.; Jeon, J. H.; Kang, S. -S.; Koo, K. -T.; Kum, K. -Y.; Chun, J.; Yun, C. -H.; Han, S. H. Journal of Dental Research, Vol.94 No.7, pp.921-927	DOI
2015-08	Complete genome sequence of Middle East respiratory syndrome coronavirus KOR/KNIH/002_05_2015, isolated in South Korea Kim, You-Jin; Cho, Yong-Joon; Kim, Dae-Won; Yang, Jeong-Sun; Kim, Hak; Park, SungHan; Han, Young Woo; Yun, Mi-ran; Lee, Han Saem; Kim, A-Reum; Heo, Deok Rim; Kim, Joo Ae; Kim, Su Jin; Jung, Hee-Dong; Kim, Namil; Yoon, Seok-Hwan; Nam, Jeong-Gu; Kang, Hae Ji; Cheong, Hyang-Min; Lee, Joo-Shil; Chun, Jongsik; Kim, Sung Soon Genome Announcements, Vol.3 No.4, p. e00787-15	view file DOI
2015-09	Paenibacillus xanthinilyticus sp nov., isolated from agricultural soil Kim, Dong-uk; Kim, Song-Gun; Lee, Hyosun; Chun, Jongsik; Cho, Jang-Cheon; Ka, Jong-Ok International Journal of Systematic and Evolutionary Microbiology, Vol.65, pp.2937-2942	DOI
2015-09	Telomere maintenance through recruitment of internal genomic regions Seo, Beomseok; Kim, Chuna; Hills, Mark; Sung, Sanghyun; Kim, Hyesook; Kim, Eunkyeong; Lim, Daisy S.; Oh, Hyun-Seok; Choi, Rachael Mi Jung; Chun, Jongsik; Shim, Jaegal; Lee, Junho Nature Communications, Vol.6, p. 8189	view file DOI
2015-09	Comparison of the genome profiles between head and body lice Kang, Jae Soon; Cho, Yong-Jun; Kim, Ju Hyeon; Kim, Sang Hyeon; Yoo, Seungil; Noh, Seung-Jae; Park, Junhyung; Yoon, Kyong Sup; Clark, J. Marshall; Pittendrigh, Barry R.; Chun, Jongsik; Lee, Si Hyeock Journal of Asia-Pacific Entomology, Vol.18 No.3, pp.377-382	DOI
2015-10	Draft genome sequence of the psychrophilic bacterium Lacinutrix jangbogonensis PAMC 27137(T) Lee, Yung Mi; Shin, Seung Chul; Baek, Kiwoon; Hwang, Chung Yeon; Hong, Soon Gyu; Chun, Jongsik; Lee, Hong Kum Marine Genomics, Vol.23, pp.31-32	DOI
2015-10	Complete genome sequence of Mycobacterium tuberculosis K from a Korean high school outbreak, belonging to the Beijing family Han, Seung Jung; Song, Taeksun; Cho, Yong-Joon; Kim, Jong-Seok; Choi, Soo Young; Bang, Hye-Eun; Chun, Jongsik; Bai, Gill-Han; Cho, Sang-Nae; Shin, Sung Jae Standards in Genomic Sciences, Vol.10, p. 78	view file DOI
2016-02	A report of 21 unreported bacterial species in Korea, belonging to the Betaproteobacteria Kim, Pil Soo; Cha, Chang-Jun; Cho, Jang-Cheon; Chun, Jongsik; Im, Wan-Tack; Jahng, Kwang Yeop; Jeon, Che Ok; Joh, Kiseong; Kim, Seung Bum; Seong, Chi Nam; Yoon, Jun-Hoon; Bae, Jin Woo Journal of Species Research, Vol.5 No.1, pp.179-187	DOI
2016-02	OrthoANI: An improved algorithm and software for calculating average nucleotide identity Lee, Imchang; Kim, Yeong Ouk; Park, Sang-Cheol; Chun, Jongsik International Journal of Systematic and Evolutionary Microbiology, Vol.66, pp.1100-1103	DOI
2016-05	A single gene of a commensal microbe affects host susceptibility to enteric infection Yoon, Mi Young; Min, Kyung Bae; Lee, Kang-Mu; Yoon, Yujin; Kim, Yaeseul; Oh, Young Taek; Lee, Keehoon; Chun, Jongsik; Kim, Byung-Yong; Yoon, Seok-Hwan; Lee, Insuk; Kim, Chan Yeong; Yoon, Sang Sun Nature Communications, Vol.7, p. 11606	view file DOI
2016-06	The effect of probiotics on gut microbiota during the helicobacter pylori eradication: Randomized controlled trial Oh, Bumjo; Kim, Bong-Soo; Kim, Ji Won; Kim, Jong Seung; Koh, Seong-Joon; Kim, Byeong Gwan; Lee, Kook Lae; Chun, Jongsik Helicobacter, Vol.21 No.3, pp.165-174	DOI
2016-06	Genome sequence of the organohalide-respiring Dehalogenimonas alkenigignens type strain (IP3-3(T)) Key, Trent A.; Richmond, Dray P.; Bowman, Kimberly S.; Cho, Yong-Joon; Chun, Jongsik; da Costa, Milton S.; Rainey, Fred A.; Moe, William M. Standards in Genomic Sciences, Vol.11, p. 44	view file DOI
2016-08	Study on Prokaryotic Community Structure in Moist Acidic Tundra Soil in Council, Alaska 김혜민	view file
2016-08	Evolutionary studies on intra-species genomic diversity of Escherichia coli using large scale genome analysis 이기현	view file
2016-08	Genomic diversity and evolution of seven Brassica species revealed by whole genome resequencing 설영주	view file
2016-08	Identification of uniformly expressed genes in Escherichia coli K-12 by using RNA-Seq data 최미정	view file
2016-11	Vertical distribution of bacterial community is associated with the degree of soil organic matter decomposition in the active layer of moist acidic tundra Kim, Hye Min; Lee, Min Jin; Jung, Ji Young; Hwang, Chung Yeon; Kim, Mincheol; Ro, Hee-Myong; Chun, Jongsik; Lee, Yoo Kyung The Journal of Microbiology, Vol.54 No.11, pp.713-723	DOI
2016-12	Characterization of microbiome in bronchoalveolar lavage fluid of patients with lung cancer comparing with benign mass like lesions Lee, Sang Hoon; Sung, Ji Yeon; Yong, Dongeun; Chun, Jongsik; Kim, Song Yee; Song, Joo Han; Chung, Kyung Soo; Kim, Eun Young; Jung, Ji Ye; Kang, Young Ae; Kim, Young Sam; Kim, Se Kyu; Chang, Joon; Park, Moo Suk Lung Cancer, Vol.102, pp.89-95	DOI
2017-02	Replication of Vibrio cholerae classical CTX phage Kim, Eun Jin; Yu, Hyun Jin; Lee, Je Hee; Kim, Jae-Ouk; Han, Seung Hyun; Yun, Cheol-Heui; Chun, Jongsik; Nair, G. Balakrish; Kim, Dong Wook Proceedings of the National Academy of Sciences of the United States of America, Vol.114 No.9, pp.2343-2348	DOI
2017-05	Introducing EzBioCloud: a taxonomically united database of 16S rRNA gene sequences and whole-genome assemblies Yoon, Seok-Hwan; Ha, Sung-Min; Kwon, Soonjae; Lim, Jeongmin; Kim, Yeseul; Seo, Hyungseok; Chun, Jongsik International Journal of Systematic and Evolutionary Microbiology, Vol.67 No.5, pp.1613-1617	DOI
2017-05	Dehalogenimonas formicexedens sp nov., a chlorinated alkane-respiring bacterium isolated from contaminated groundwater Key, Trent A.; Bowman, Kimberly S.; Lee, Imchang; Chun, Jongsik; Albuquerque, Luciana; da Costa, Milton S.; Rainey, Fred A.; Moe, William M. International Journal of Systematic and Evolutionary Microbiology, Vol.67 No.5, pp.1366-1373	DOI
2017-06	ContEst16S: An algorithm that identifies contaminated prokaryotic genomes using 16S RNA gene sequences Lee, Imchang; Chalita, Mauricio; Ha, Sung-Min; Na, Seong-In; Yoon, Seok-Hwan; Chun, Jongsik International Journal of Systematic and Evolutionary Microbiology, Vol.67 No.6, pp.2053-2057	DOI
2017-08	Development of prokaryotic taxonomy-based 16S rRNA and genome database 윤석환	view file
2017-08	Study on the diversity and ecological functions of bacterial communities in the Southern Ocean 이영미	view file
2017-10	A large-scale evaluation of algorithms to calculate average nucleotide identity Yoon, Seok-Hwan; Ha, Sung-min; Lim, Jeongmin; Kwon, Soonjae; Chun, Jongsik Antonie van Leeuwenhoek, International Journal of General and Molecular Microbiology, Vol.110 No.10, pp.1281-1286	DOI

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