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합성 스캐폴드 단백질을 이용한 MAPK 신호전달의 재구성과 인위적 조작 : Reconstruction and artificial manipulation of the MAP kinase signaling cascade using synthetic scaffold proteins

DC Field Value Language
dc.contributor.advisor박상현-
dc.contributor.author류지훈-
dc.date.accessioned2017-07-14T00:50:25Z-
dc.date.available2017-07-14T00:50:25Z-
dc.date.issued2015-08-
dc.identifier.other000000053343-
dc.identifier.urihttps://hdl.handle.net/10371/121424-
dc.description학위논문 (박사)-- 서울대학교 대학원 : 생명과학부, 2015. 8. 박상현.-
dc.description.abstractActing as a hub for eukaryotic cell signaling, scaffold proteins are attractive targets for engineering and manipulating signaling circuits. The ultimate experimental challenge to this premise is to reconstruct a signaling pathway using a rationally designed scaffold with modular architecture. Here, we designed synthetic scaffolds to reorganize the MAPK pathway involved in mating in yeast. The synthetic scaffolds composed of modular interaction domains recruited three member kinases to the plasma membrane and were capable of generating the signaling responses by functioning as logic gates of signaling circuits. The modular architecture of the synthetic scaffold assembly allowed the artificial manipulation of signaling behaviors, including the modulation of signaling strength and the incorporation of a negative control. Furthermore, this study demonstrated that three tiers of the MAPK pathway exhibited decreasing positional plasticity from the top (MAPKKK) to the bottom (MAPK) tier, suggesting that novel pathway connectivities could be generated. This synthetic approach with designer scaffolds should allow the rational manipulation or engineering of signaling pathways and provide insight into the functional mechanisms of scaffold proteins and scaffold-dependent pathway evolution.-
dc.description.tableofcontentsTABLE OF CONTENTS

ABSTRACT 1
COPYRIGHT INFORMATION 3
TABLE OF CONTENTS 4
LIST OF FIGURES 6
LIST OF TABLES 8
ABBREVIATION 9
INTRODUCTION 11
RESULTS 15
The designer synthetic scaffold proteins generated mating responses 15
A circuit board for wiring signaling connectivity 20
Modular characteristics allow for the artificial manipulation of signaling behaviors 30
Positional plasticity in the MAPK signaling circuit 35
Unique behaviors of the synthetic scaffolds 45
DISCUSSION 53
CONCLUSION 61
MATERIALS AND METHODS 64
Cell culture, constructs and strains 64
Co-immunoprecipitation 65
Fus1-lacZ assay 66
Mating assays 67
Flow cytometry 67
Halo assay 68
ERK dual phosphorylation assay. 68
REFERENCES 81
ABSTRACT IN KOREAN 88
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dc.formatapplication/pdf-
dc.format.extent2182712 bytes-
dc.format.mediumapplication/pdf-
dc.language.isoen-
dc.publisher서울대학교 대학원-
dc.subjectMAPK signaling pathway-
dc.subjectSynthetic scaffold protein-
dc.subjectmodular architecture-
dc.subjectpositional plasticity-
dc.subjectscaffold-dependent pathway evolution-
dc.subject.ddc570-
dc.title합성 스캐폴드 단백질을 이용한 MAPK 신호전달의 재구성과 인위적 조작-
dc.title.alternativeReconstruction and artificial manipulation of the MAP kinase signaling cascade using synthetic scaffold proteins-
dc.typeThesis-
dc.description.degreeDoctor-
dc.citation.pages89-
dc.contributor.affiliation자연과학대학 생명과학부-
dc.date.awarded2015-08-
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