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합성 스캐폴드 단백질을 이용한 MAPK 신호전달의 재구성과 인위적 조작 : Reconstruction and artificial manipulation of the MAP kinase signaling cascade using synthetic scaffold proteins
DC Field | Value | Language |
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dc.contributor.advisor | 박상현 | - |
dc.contributor.author | 류지훈 | - |
dc.date.accessioned | 2017-07-14T00:50:25Z | - |
dc.date.available | 2017-07-14T00:50:25Z | - |
dc.date.issued | 2015-08 | - |
dc.identifier.other | 000000053343 | - |
dc.identifier.uri | https://hdl.handle.net/10371/121424 | - |
dc.description | 학위논문 (박사)-- 서울대학교 대학원 : 생명과학부, 2015. 8. 박상현. | - |
dc.description.abstract | Acting as a hub for eukaryotic cell signaling, scaffold proteins are attractive targets for engineering and manipulating signaling circuits. The ultimate experimental challenge to this premise is to reconstruct a signaling pathway using a rationally designed scaffold with modular architecture. Here, we designed synthetic scaffolds to reorganize the MAPK pathway involved in mating in yeast. The synthetic scaffolds composed of modular interaction domains recruited three member kinases to the plasma membrane and were capable of generating the signaling responses by functioning as logic gates of signaling circuits. The modular architecture of the synthetic scaffold assembly allowed the artificial manipulation of signaling behaviors, including the modulation of signaling strength and the incorporation of a negative control. Furthermore, this study demonstrated that three tiers of the MAPK pathway exhibited decreasing positional plasticity from the top (MAPKKK) to the bottom (MAPK) tier, suggesting that novel pathway connectivities could be generated. This synthetic approach with designer scaffolds should allow the rational manipulation or engineering of signaling pathways and provide insight into the functional mechanisms of scaffold proteins and scaffold-dependent pathway evolution. | - |
dc.description.tableofcontents | TABLE OF CONTENTS
ABSTRACT 1 COPYRIGHT INFORMATION 3 TABLE OF CONTENTS 4 LIST OF FIGURES 6 LIST OF TABLES 8 ABBREVIATION 9 INTRODUCTION 11 RESULTS 15 The designer synthetic scaffold proteins generated mating responses 15 A circuit board for wiring signaling connectivity 20 Modular characteristics allow for the artificial manipulation of signaling behaviors 30 Positional plasticity in the MAPK signaling circuit 35 Unique behaviors of the synthetic scaffolds 45 DISCUSSION 53 CONCLUSION 61 MATERIALS AND METHODS 64 Cell culture, constructs and strains 64 Co-immunoprecipitation 65 Fus1-lacZ assay 66 Mating assays 67 Flow cytometry 67 Halo assay 68 ERK dual phosphorylation assay. 68 REFERENCES 81 ABSTRACT IN KOREAN 88 | - |
dc.format | application/pdf | - |
dc.format.extent | 2182712 bytes | - |
dc.format.medium | application/pdf | - |
dc.language.iso | en | - |
dc.publisher | 서울대학교 대학원 | - |
dc.subject | MAPK signaling pathway | - |
dc.subject | Synthetic scaffold protein | - |
dc.subject | modular architecture | - |
dc.subject | positional plasticity | - |
dc.subject | scaffold-dependent pathway evolution | - |
dc.subject.ddc | 570 | - |
dc.title | 합성 스캐폴드 단백질을 이용한 MAPK 신호전달의 재구성과 인위적 조작 | - |
dc.title.alternative | Reconstruction and artificial manipulation of the MAP kinase signaling cascade using synthetic scaffold proteins | - |
dc.type | Thesis | - |
dc.description.degree | Doctor | - |
dc.citation.pages | 89 | - |
dc.contributor.affiliation | 자연과학대학 생명과학부 | - |
dc.date.awarded | 2015-08 | - |
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