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Screening and Characterization of β-glucosidase Producing Bifidobacterium animalis subsp. lactis LT19-2 Isolated from Infant Feces : β-glucosidase를 생산하는 유아분변 유래 Bifidobacterium animalis subsp. lactis LT19-2의 선발과 특성 규명

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dc.contributor.advisor허철성-
dc.contributor.author김승일-
dc.date.accessioned2017-10-31T07:43:53Z-
dc.date.available2020-10-06T08:59:10Z-
dc.date.issued2017-08-
dc.identifier.other000000145723-
dc.identifier.urihttps://hdl.handle.net/10371/137480-
dc.description학위논문 (석사)-- 서울대학교 국제농업기술대학원 국제농업기술학과, 2017. 8. 허철성.-
dc.description.abstractβ-glucosidase (E.C 3.2.1.21) catalyzes hydrolysis of β-glucosidic natural compounds such as genistein and ginsenoside. The aglycone moiety, a result of hydrolysis, has enhanced bioavailability and potent physiological effects such as antitumor and anti-inflammation. As probiotics, bifidobacteria are major intestinal microflora in human and have several health promoting effects to host. They also have genes associated with carbohydrate modifying enzymes and play an important role in carbohydrate fermentation in the colon of host. Bifidobacteria which can produce β-glucosidase lead to synergistic health benefits and have useful application benefits. Nevertheless, there is less research on screening and characterization of bifidobacteria with β-glucosidase. The aim of this study is screening and characterization of Bifidobacterium animalis subsp. lactis LT19-2 with β-glucosidase activity.
B. animalis subsp. lactis LT19-2 had one chromosome with a 1,923,614 bp and a G + C content of 60.49 %. The chromosome contained total 1,610 genes that included 1,551 of CDSs (coding sequences) and 59 of RNA genes. RNA genes contained 52 of tRNA, and 6 of rRNA. Whole genome sequencing of B. animalis subsp. lactis LT19-2 revealed that they had two β-glucosidase encoding genes, bglA and bglB. BglA and BglB were categorized as GH (glycosyl hydrolase)1 and GH3, respectively.
The enzymes were purified by ammonium precipitation, DEAE sepharose fast flow, and sephadex G-100. Purification fold of purified BglA and BglB was 10.6 times and 13.25 times higher than that of the crude extract, respectively. The reactive conditions such as pH, temperature and metal ions with purified enzyme were optimized. Also, enzyme kinetic parameters were calculated by linear plot of Lineweaver-Burk equation.
In this study, B. animalis subsp. lactis LT19-2 with β-glucosidase activity was successfully screened. Additionally, to optimize the reactive condition of β-glucosidases, β-glucosidases from B. animalis subsp. lactis LT19-2 were purified and investigated.
The conversion of glucosides using probiotics such as bifidobacterium might be valuable process in industry. Especially, B. animalis subsp. lactis LT19-2 with β-glucosidase could lead to increased bioavailability and physiological effects as well as indigenous probiotic effects of Bifidobacterium strain.
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dc.description.tableofcontentsAbstract ⅰ
Contents ⅳ
List of Tables ⅵ
List of Figures ⅶ
List of Abbreviations ⅸ

Chapter 1. Introduction 1

Chapter 2. Review of Literature 4
2.1. Bifidobacterium 4
2.1.1. Bifidobacterium 4
2.1.2. Bifidobacterium as probiotics 5
2.1.3. Bifidobacterial carbohydrate metabolism 8
2.2. β-glucosidase 9
2.2.1. β-glucosidase 9
2.2.2. Classification and structure 10
2.2.3. Mode of action 11
2.2.4. Industrial Application 13

Chapter 3. Material and Methods 14
3.1. Screening of β-glucosidase producing Bifidobacterium 14
3.1.1. Isolation of Bifidobacterium 14
3.1.2. Enzyme assay 15
3.1.3. 16s rRNA sequence 16
3.2. Whole genome sequencing and its analysis 17
3.3. Relative quantification of gene expression 20
3.3.1. Primer design 20
3.3.2. RNA extraction and cDNA synthesis 22
3.3.3. qRT-PCR 23
3.4. Enzyme purification 24
3.4.1. Purification 24
3.4.2. Protein assay 25
3.4.3. SDS-PAGE and Native-PAGE 25
3.5. Enzyme reactive conditions 27
3.5.1. pH and temperature 27
3.5.2. Metal ions 27
3.5.3. Enzyme kinetic analysis 27

Chapter 4. Results 29
4.1. Isolation and identification of β-glucosidase producing bifidobacteria 29
4.2. Genomic analysis and its characterizaton 31
4.3. Relative quantification of β-glucosidase encoding gene expression 39
4.4. Enzyme purification 41
4.4.1. Purification of β-glucosidase 41
4.4.2. Molecular weight determination and activity staining 45
4.5. Optimization of enzyme reactive conditions 47
4.5.1. Effect of pH and temperature on the activity of β-glucosidases 47
4.5.2. Effect of metal ions on the activity of β-glucosidases 49
4.5.3. Enzyme kinetic analysis 51

Chapter 5. Discussion 52

References 57

Abstract in Korean 69
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dc.formatapplication/pdf-
dc.format.extent1810846 bytes-
dc.format.mediumapplication/pdf-
dc.language.isoen-
dc.publisher서울대학교 국제농업기술대학원-
dc.subjectβ-glucosidase-
dc.subjectBifidobacterium-
dc.subjectProbiotics-
dc.subject.ddc631-
dc.titleScreening and Characterization of β-glucosidase Producing Bifidobacterium animalis subsp. lactis LT19-2 Isolated from Infant Feces-
dc.title.alternativeβ-glucosidase를 생산하는 유아분변 유래 Bifidobacterium animalis subsp. lactis LT19-2의 선발과 특성 규명-
dc.typeThesis-
dc.contributor.AlternativeAuthorSeung Il Kim-
dc.description.degreeMaster-
dc.contributor.affiliation국제농업기술대학원 국제농업기술학과-
dc.date.awarded2017-08-
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