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Ecology of the azaspiracid producer dinoflagellate Azadinium poporum from Shiwha bay, Korea: - taxonomy, population dynamics, azaspiracid content, predation, and growth : 한국 시화호 해역의 azaspiracid 생산자인 Azadinium poporum 의 생태 연구: 분류, 개체군 동태, azaspiracid, 포식 및 성장

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dc.contributor.advisor정해진-
dc.contributor.author에릭포트빈-
dc.date.accessioned2017-07-14T00:36:16Z-
dc.date.available2017-07-14T00:36:16Z-
dc.date.issued2014-08-
dc.identifier.other000000022094-
dc.identifier.urihttps://hdl.handle.net/10371/121213-
dc.description학위논문 (박사)-- 서울대학교 대학원 : 지구환경과학부, 2014. 8. 정해진.-
dc.description.abstractThe azaspiracids (AZAs) are the most recently discovered group of lipophilic marine biotoxins of microalgal origin associated with cases of shellfish poisoning in humans. Since the discovery of Azadinium spinosum as a primary producer of AZA, there has been an urgent need to know more about closely related species and their distribution, the variety of AZA analogues they are producing, their population dynamics in the field, their ecophysiology, and their ecological niche within the planktonic food web.

At the initiation of that work, species of the genus Azadinium were only known from northern European waters. Following the isolation of another strain of the genus Azadinium in 2010 from Shiwha bay, a highly eutrophic area from Korea, works were undertaken in order to explore the taxonomic identity, content of AZA, population dynamics in the field, variety of grazers, and physiology of the new isolate.

The morphology based on optical and scanning electron microscopy as well as the ITS rDNA region and LSU rRNA gene phylogenies demonstrated that the strain was closely related to Azadinium poporum, but minor morphological dissimilarities and an instable phylogenetic position led us to designate it as Azadinium cf. poporum at the time. Later work revealed that the strain was conspecific with Azadinium poporum. This work extended the known distribution of the genus Azadinium further south.

The strain isolated from Shiwha bay preliminarily showed not to contain any known AZA. However, further analyses of the Korean strain by triple quadrupole mass spectrometry on the precursor and product ion mode revealed a new compound, or analogue, with high similarity to AZAs. The structure of the new compound was proposed by interpretation of fragmentation patterns and high resolution mass measurements using Fourier transform ion cyclotron resonance-mass spectrometry. This work increased the known molecular diversity of AZA produced by species in the genus Azadinium.

The long term temporal dynamics of species of the genus Azadinium in the field was completely unknown. Therefore, the population dynamics of A. poporum from Shiwha bay was investigated by qPCR (quantitative polymerase chain reaction). A. poporum revealed to occur always in relatively low concentration from 2009 to 2011 in comparison to common species found in Shiwha bay.

The reduced knowledge on interactions implicating Azadinium within the planktonic food web, the relevance of the Korean isolate of A. poporum as an AZA producer, and the possible role of predation in its field dynamics led us to determine its protistan and metazoan grazers. Furthermore, grazing and growth rates as well as gross growth efficiencies were established for some grazers. Many protistan grazers and copepods were able to feed on A. poporum. However, only two species, the heterotrophic dinoflagellate Oxyrrhis marina and the ciliate Strobilidium sp., were able to achieve sustained growth on A. poporum as the sole prey. Furthermore, for these predators, the maximum ingestion rates and maximum growth rates were the highest and lowest when compared with other prey species, respectively. This suggests that A. poporum was a low quality prey. In addition, the field concentrations of A. poporum assessed by qPCR were generally too low to affect the dynamics of the predators found in this study. Therefore, predation reveals unlikely to be a driving force in the dynamics of A. poporum in the field.

In order to further determine the causes explaining the dynamics of A. poporum in Shiwha bay, we assessed the tendency and seasonality of some environmental parameters through time such as the temperature, the salinity, the pH, the dissolved oxygen, the Secchi depth, the concentration of nutrients, and the concentration of chlorophyll a. We also determined if the previous parameters had an effect on A. poporum in the field as well as the effects of temperature, salinity, and light on the growth of A. poporum in laboratory. The species revealed to grow on a wide range of temperature and salinity and was therefore generally well adapted to the highly variable field conditions observed in Shiwha bay. Furthermore, the species revealed to be well adapted to low irradiance. The growth rates of A. poporum estimated in laboratory were also relatively high compared with other photosynthetic and mixotrophic dinoflagellates under photosynthetic growth. Such features do not explain the low abundances obtained from the field samples. However, A. poporum revealed to be more represented in the field when the concentrations of nitrite and nitrate, silicate, as well as chlorophyll a were lower and the transparency was higher. This suggests that A. poporum use reduced trophic state as windows of opportunity. Considering the low concentrations of A. poporum obtained from field samples during the survey of three years, these opportunities might represent a survival strategy in eutrophic environment.

The multifaceted studies cumulated in this thesis strengthen previous area of research related to the genus Azadinium and established new foundations in unexplored areas from which further studies can rise.
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dc.description.tableofcontentsContents

Chapter 1 Introduction 1
1.1 Generalities 1
1.2 Dinoflagellates 5
1.3 Ecology of toxic dinoflagellate 5
1.3.1 Biotic factors 5
1.3.1.1 Toxic potency 6
1.3.1.2 Predation 6
1.3.1.3 Mixotrophy 7
1.3.1.4 Allelopathy and cell contact 7
1.3.2 Abiotic factors 8
1.3.2.1 Temperature 8
1.3.2.2 Salinity 9
1.3.2.3 Light intensity 9
1.3.2.4 Turbulence 9
1.3.2.5 pH 10
1.3.2.6 Nutritional factors 10
1.3.2.6.1 Macronutrients 10
1.3.2.6.2 Micronutrients 10
1.4 Study area 11
1.5 Context of the study 15

Chapter 2 Taxonomy 25
2.1 Abstract 25
2.2 Keywords 26
2.3 Introduction 26
2.4 Materials and methods 28
2.4.1 Collection and culturing of Azadinium cf. poporum 28
2.4.2 Morphology of Azadinium cf. poporum 28
2.4.3 DNA extraction, PCR amplification, and sequencing 30
2.4.4 Sequence availability and phylogenetic analysis 31
2.4.5 Chemical analysis of azaspiracids 36
2.5 Results 37
2.5.1 Morphology of Azadinium cf. poporum 37
2.5.2 Molecular characterization of Azadinium cf. poporum 47
2.5.3 Azaspiracids 51
2.6 Discussion 51
2.6.1 Distribution 51
2.6.2 Morphology 52
2.6.3 Molecular characterization 57
2.6.4 Azaspiracids 58

Chapter 3 Azaspiracid 60
3.1 Abstract 60
3.2 Keywords 60
3.3 Introduction 60
3.4 Materials and methods 64
3.4.1 Algal culture 64
3.4.2 Toxin extraction and preparation 64
3.4.3 Multiple reaction monitoring (MRM) measurements 64
3.4.4 Precursor ion experiments 66
3.4.5 Product ion spectra 66
3.4.6 FTICR-MS measurements 66
3.4.7 Methylation of AZAs 67
3.5 Results and discussion 68

Chapter 4 Predation 78
4.1 Abstract 78
4.2 Keywords 79
4.3 Introduction 79
4.4 Materials and methods 81
4.4.1 Preparation of experimental organisms 81
4.4.2 Feeding 83
4.4.3 Growth, ingestion, and gross growth efficiency 86
4.4.4 Field data 90
4.4.5 Grazing impact 96
4.4.6 Swimming speed 97
4.5 Results 98
4.5.1 Growth rate 98
4.5.2 Ingestion rate 101
4.5.3 Gross growth efficiency 103
4.5.4 Dynamics of Azadinium cf. poporum 103
4.5.5 Grazing impact 105
4.5.6 Swimming speed 105
4.6 Discussion 105
4.6.1 Feeding 105
4.6.2 Growth and ingestion rates 108
4.6.3 Dynamics of Azadinium cf. poporum 109
4.6.4 Grazing impact 113
4.6.5 Ecological implications 113

Chapter 5 Physiology 115
5.1 Abstract 115
5.2 Keywords 115
5.3 Introduction 116
5.4 Materials and methods 118
5.4.1 Study area 118
5.4.2 Field data 118
5.4.3 Maintenance of the experimental organism 119
5.4.4 Effect of temperature, salinity, and light on growth 119
5.4.5 Occurrence 122
5.5 Results 122
5.5.1 Field 122
5.5.2 Effect of temperature, salinity, and light on growth 127
5.5.3 Occurrence 127
5.6 Discussion 134
Conclusion 140
Bibliography 141
Acknowledgments 176
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dc.formatapplication/pdf-
dc.format.extent5362873 bytes-
dc.format.mediumapplication/pdf-
dc.language.isoen-
dc.publisher서울대학교 대학원-
dc.subjectMorphology-
dc.subjectrDNA-
dc.subjectdistribution-
dc.subjecttoxin-
dc.subjectgrazing-
dc.subjecttolerance-
dc.subjectsalinity-
dc.subjecttemperature-
dc.subjectlight-
dc.subjectpH-
dc.subjectdissolved oxygen-
dc.subjecttransparency-
dc.subjectnutrients-
dc.subjectchlorophyll a-
dc.subject.ddc550-
dc.titleEcology of the azaspiracid producer dinoflagellate Azadinium poporum from Shiwha bay, Korea: - taxonomy, population dynamics, azaspiracid content, predation, and growth-
dc.title.alternative한국 시화호 해역의 azaspiracid 생산자인 Azadinium poporum 의 생태 연구: 분류, 개체군 동태, azaspiracid, 포식 및 성장-
dc.typeThesis-
dc.description.degreeDoctor-
dc.citation.pages177-
dc.contributor.affiliation자연과학대학 지구환경과학부-
dc.date.awarded2014-08-
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