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The AT-hook motif-containing protein AHL22 regulates flowering initiation by modifying FLOWERING LOCUS T chromatin : AT-hook motif를 포함한 AHL22 protein의 FT chromatin 변형을 통한 개화 시기 조절

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dc.contributor.advisor박충모-
dc.contributor.author윤주-
dc.date.accessioned2017-07-14T05:52:59Z-
dc.date.available2017-07-14T05:52:59Z-
dc.date.issued2014-02-
dc.identifier.other000000018114-
dc.identifier.urihttps://hdl.handle.net/10371/125252-
dc.description학위논문 (박사)-- 서울대학교 대학원 : 화학부, 2014. 2. 박충모.-
dc.description.abstractCoordination of the onset of flowering with developmental status and seasonal cues is critical for reproductive success in plants. Molecular genetic studies on Arabidopsis mutants that have alterations in flowering time have identified a wide array of genes that belong to distinct genetic flowering pathways. The flowering time genes are regulated through versatile molecular and biochemical mechanisms, such as controlled RNA metabolism and chromatin modifications. Recent studies have shown that a group of AT-hook DNA-binding motif-containing proteins plays a role in plant developmental processes and stress responses.
Here, I demonstrate that the AT-hook protein AHL22 (AT-hook motif nuclear localized 22) regulates flowering time by modifying FLOWERING LOCUS T (FT) chromatin in Arabidopsis. I showed that AHL22 and FT are expressed together in leaf vascular tissues and that AHL22 represses FT expression throughout development. AHL22 binds to a stretch of AT-rich sequence in the FT locus. AHL22 interacts with a subset of histone deacetylases. An Arabidopsis mutant overexpressing the AHL22 gene (OE-AHL22) exhibited delayed flowering, and FT transcription was significantly reduced in the mutant.
Consistent with the delayed flowering and FT suppression in the OE AHL22 mutant, histone 3 (H3) acetylation was reduced and H3 lysine 9 dimethylation was elevated in the FT chromatin.
I propose that AHL22 acts as a chromatin chromatin remodeling factor that modifies the architecture of FT chromatin by modulating both H3 acetylation and methylation.
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dc.description.tableofcontentsABSTRACT i
CONTENTS iii
LIST OF FIGURES vi
LIST OF TABLES viii
ABBREVIATIONS ix
I. BACKGROUND 1
1.1. Flowering time control in Arabidopsis1
1.2. Genetic flowering pathway in Arabidopsis3
1.3. The regulation of flowering by chromatin-based mechanisms 7
1.4. Chromatin organization and nuclear matrix 11
1.5. Functions of AT-hook DNA binding proteins 13
1.6. The purpose of this research 17
II. INTRODUCTION 20
III. MATERIALS AND METHODS 24
3.1. Plant materials and growth conditions 24
3.2. Isolation of OE-AHL22 mutant 24
3.3. Analysis of transcript levels 25
3.4. Flowering time measurements 26
3.5. AHL22 binding to FT DNA 26
3.6. Nuclear matrix isolation for protein analysis 27
3.7. Chromatin immunoprecipitation assays (ChIP) 28
3.8. Electrophoretic mobility shift assays (EMSA) 29
3.9. Subcellular localization assays 29
3.10. in vitro pull-down 30
3.11. Histochemical staining 31
3.12. Phylogenetic analysis 31
IV. RESEULTS 34
4.1. Pleiotropic phenotypes of OE-AHL22 mutant 34
4.2. AHL22 encodes an AT-Hook DNA-binding protein 38
4.3. FT is repressed in OE-AHL22 mutant 39
4.4. Binding of AHL22 to FT DNA 52
4.5. Effects of AT-Hook mutation on AHL22 function in flowering 66
4.6. AHL22 suppression of FT in flowering 69
4.7. AHL22 regulation of H3 acetylation and methylation in FT chromatin 73
4.8. Interactions of AHL22 with HDACs 76
V. DISCUSSION 85
VI. REFERENCES 91
VII. PUBLICATION LIST 110
VIII. ABSTRACT IN KOREAN 112
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dc.formatapplication/pdf-
dc.format.extent4138956 bytes-
dc.format.mediumapplication/pdf-
dc.language.isoen-
dc.publisher서울대학교 대학원-
dc.subjectArabidopsis-
dc.subjectflowering time-
dc.subjectAT-hook DNA binding protein-
dc.subjectAT-rich sequence-
dc.subjectFT-
dc.subjectchromatin-
dc.subject.ddc540-
dc.titleThe AT-hook motif-containing protein AHL22 regulates flowering initiation by modifying FLOWERING LOCUS T chromatin-
dc.title.alternativeAT-hook motif를 포함한 AHL22 protein의 FT chromatin 변형을 통한 개화 시기 조절-
dc.typeThesis-
dc.description.degreeDoctor-
dc.citation.pagesX, 113-
dc.contributor.affiliation자연과학대학 화학부-
dc.date.awarded2014-02-
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