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Functional Characterization of a Histone Lysine Demethylase Gene in the Rice Blast Fungus, Magnaporthe oryzae

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dc.contributor.advisor이용환-
dc.contributor.author허아람-
dc.date.accessioned2017-07-14T06:41:28Z-
dc.date.available2017-07-14T06:41:28Z-
dc.date.issued2014-02-
dc.identifier.other000000017975-
dc.identifier.urihttps://hdl.handle.net/10371/125845-
dc.description학위논문 (석사)-- 서울대학교 대학원 : 농생명공학부, 2014. 2. 이용환.-
dc.description.abstractThe post-translational modification of histones plays important roles in regulating chromatin dynamics and transcription. It has been shown that disruption of proper modifications can lead to developmental defects and cancer in plants and mammals, respectively. Despite the generality of histone modifications as epigenetic mechanism in eukaryotes, implication of histone modifications in fungal pathogenesis is beginning to emerge. To date, two classes of histone demethylases have been identified: LSD and JmjC domain-containing family proteins. Here I reported identification and characterization of putative histone JmjC demethylases in the model plant pathogenic fungus, Magnaporthe oryzae. Combining BLAST and HMMER, seven genes encoding putative JmjC domain-containing histone demethylase were identified and named them as MoJMJ1 to MoJMJ7. Phylogenetic analysis showed that five of them belong to JARID, JMJD2, JHDM2 and JmjC-only domain groups, and the others were predicted to be fungal specific. Deletion of MoJMJ1, belonging to JARID group, resulted in defects in vegetative growth, asexual reproduction, autolysis, appressorium formation and invasive growth. The genetic approach was followed by biochemical approaches to examine the demethylase activity and identify target genes affected by steady state level of histone methylation. The expression of the genes, involved in signaling transduction pathways for appressorium development, and other TFs including MoHOX genes showed significant changes in ΔMojmj1. Introduction of native MoJMJ1 gene into ∆Mojmj1 restored not all but defects in vegetative growth, asexual reproduction, autolysis and appressorium formation, indicating the importance of regulating histone demethylation by MoJMJ1 during fungal development and appressorium formation. It is anticipated that this work would provide not only the insight into epigenetic regulation of fungal pathogenesis but also the knowledge that can be used in devising new control strategies against rice blast.-
dc.description.tableofcontentsABSTRACT

CONTENTS
LIST OF TABLES
LIST OF FIGURES

INTRODUCTION
MATERIALS AND METHODS
I. Fungal strains and culture condition
II. Sequence and phylogeneitc analysis
III. Nucleic acid isolation and manipulation
IV. Targeted deletion of MoJMJ1 mutants and complemented strains
V. Developmental phenotype assays – Mycelial growth, conidiation, conidial germination, and appressorium formation
VI. Pathogenicity test, wound inoculation, and sheath assay
VII. Quantitative real-time PCR (qRT-PCR)
VIII. Western blotting analysis

RESULTS
I. Identification of putative genes encoding JmjC histone demethylase in M. oryzae
II. Domain architecture and conserved motifs in JmjC domain of MoJMJ
III. Targeted gene disruption of MoJMJ1
IV. Vegetative growth of ΔMojmj1 mutants
V. Asexual reproduction of ΔMojmj1 mutants
VI. Conidial germination and appressorium development of ΔMojmj1
VII. Host penetration of ΔMojmj1 mutants
VIII. Invasive growth of ΔMojmj1 mutants
IX. Transcriptional regulation of the development and pathogenicity-related genes
X. Immunoblot assay of MoJMJ1
XI. Complementation assay of MoJMJ1

DISCUSSION
LITERATURE CITED
ABSTRACT IN KOREAN
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dc.formatapplication/pdf-
dc.format.extent3457926 bytes-
dc.format.mediumapplication/pdf-
dc.language.isoen-
dc.publisher서울대학교 대학원-
dc.subjecthistone demethylase-
dc.subjectMagnaporthe oryzae-
dc.subjectpathogencity-
dc.subjectappressorium development-
dc.subject.ddc630-
dc.titleFunctional Characterization of a Histone Lysine Demethylase Gene in the Rice Blast Fungus, Magnaporthe oryzae-
dc.typeThesis-
dc.description.degreeMaster-
dc.citation.pages62-
dc.contributor.affiliation농업생명과학대학 농생명공학부-
dc.date.awarded2014-02-
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