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Production of functional single-chain variable fragment against Tumor Necrosis Factor alpha in engineered Escherichia coli. : 재조합 대장균에서 종양괴사인자에 특이적인 재조합 단일사슬 항체의 생산

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dc.contributor.advisor서진호-
dc.contributor.author김지나-
dc.date.accessioned2017-07-14T06:45:31Z-
dc.date.available2017-07-14T06:45:31Z-
dc.date.issued2016-02-
dc.identifier.other000000132243-
dc.identifier.urihttps://hdl.handle.net/10371/125927-
dc.description학위논문 (석사)-- 서울대학교 대학원 : 농생명공학부 농생명공학전공, 2016. 2. 서진호.-
dc.description.abstractHuman TNF-alpha is a non-glycosylated protein of 17 kDa molecular weight and trimeric in vivo. Low levels of human TNFα aid in maintaining homeostasis and promoting the replacement of injured tissue, however, high levels of human TNFα cause autoimmune diseases such as reumatoid arthritis. To regulate the level of h-TNFα, many therapeutic antibodies for target h-TNFα have been produced. Production of small sized recombinant antibodies such as single-chain variable fragment (scFv) would be more effective than production of monoclonal antibodies. ScFv is a fusion protein of the variable regions of the heavy (VH) and light chains (VL) of immunoglobulins, connected with a short linker peptide of ten to about 25 amino acids. In previous research, genes for the scFv of a monoclonal antibody (mAb) against TNF-α were cloned and expressed in Escherichia coli. However, the scFv was expressed in insoluble form, so the purified scFv was refolded in vitro to acquire soluble and active scFv.
To produce soluble scFv against human TNF-α in recombinant E. coli C41(DE3), the expression vector for the scFv against TNFα fused with the maltose binding protein (MBP) was applied. The vector was constructed and transformed into E. coli C41(DE3). The resulting strain was able to express the scFv successfully in soluble form. Second, the scFv and MBP fusion protein was purified by affinity chromatography using MBP as a ligand and the binding activity of the purified scFv against TNFα was verified by using Biacore T100. The association constant (ka) of 2040 (1/M•s) and dissociation constant (kd) of 0.001769 (1/s) were estimated. Finally, the KD value defined as the equilibrium dissociation constant between the antibody and its antigen was determined to 8.671E-7 (M). The lower KD value represents that the antibody has the higher affinity to an antigen. As typical antibodies have the KD value of 10-7~10-8 (M). The biological function of the scFv tw TNFα produced in E. coli could be confirmed.
Third, production of anti-TNFα scFv by fed-batch fermentation of engineered E. coli was attempted to produce 72.7 mg/L.
In conclusion, this thesis has demonstrated production of the functional scFv against human TNFα in recombinant E. coli for diagnosis and therapeutic applications.
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dc.description.tableofcontentsI. INTRODUCTION 1
1. Tumor Necrosis Factor alpha (TNFα) 1
2. Anti-TNFα 2
3. Single-chain variable region fragment antibody (scFv) 2
4. Affinity tags 4
5. E. coli strains for protein expression 5
6. Surface plasmon resonance 6
7. Objectives of the thesis 15

II. MATERIALS AND METHODS 16
1. Plasmids and strains 16
1.1. Enzymes and reagents 16
1.2. Oligonucleotides 17
1.3. Strains and plasmids 18
1.4. Recombinant DNA techniques 18
1.4.1. Polymerase chain reaction (PCR) 19
1.4.2. Construction of expression plasmids 20
1.5. DNA sequencing 20
2. Expression of proteins 21
2.1. Transformation and expression of fusion proteins 21
2.2. SDS-PAGE 22
2.3. Fed-batch fermentation 24
3. Purification and quantitative analysis of scFv 25
3.1. Purification 25
3.1.1. Affinity chromatography 25
3.1.2. Dialysis 26
3.2. Quantitative analysis 26
3.2.1. Bradford assay 26
4. Immunological analysis 27
4.1. Indirect ELISA 27
4.2. Surface Plasmon resonance 28

III. RESULTS AND DISSCUSSIONS 34
1. Plasmids and strains 34
1.1. Construction of expression plasmids and strains 34
2. Expression of proteins 34
2.1. ScFv and MBP fusion protein expression 34
2.2. Fed-batch fermentation 35
3. Purification and quantitative analysis of scFv 36
4. Immunological analysis of scFv 37
4.1. Indirect ELISA 37
4.2. Surface Plasmon resonance 38
4.2.1. Anti-TNFα scFv fused with MBP tag 38
4.2.2. Anti-TNFα monoclonal antibody produced in mouse 39

IV. CONCLUSIONS 48

V. REFERENCES 49

국문초록 58
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dc.formatapplication/pdf-
dc.format.extent3936223 bytes-
dc.format.mediumapplication/pdf-
dc.language.isoen-
dc.publisher서울대학교 대학원-
dc.subjectEscherichia coli-
dc.subjectTumor Necrosis Factor alpha-
dc.subjectscFv-
dc.subjectfusion protein-
dc.subjectsurface plasmon resonance-
dc.subject.ddc630-
dc.titleProduction of functional single-chain variable fragment against Tumor Necrosis Factor alpha in engineered Escherichia coli.-
dc.title.alternative재조합 대장균에서 종양괴사인자에 특이적인 재조합 단일사슬 항체의 생산-
dc.typeThesis-
dc.description.degreeMaster-
dc.citation.pagesx, 59-
dc.contributor.affiliation농업생명과학대학 농생명공학부-
dc.date.awarded2016-02-
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