Publications
Detailed Information
(The) type III effector XopN of Xanthomonas oryzae pv. oryzae Targets OsVOZ2 and a putative thiamine synthase in rice : 벼흰잎마름병균이 분비하는 Type III Effector XopN과 벼의 단백질 OsVOZ2, Putative Thiamine Synthase의 상호작용
DC Field | Value | Language |
---|---|---|
dc.contributor.advisor | 황인규 | - |
dc.contributor.author | 정훈 | - |
dc.date.accessioned | 2017-07-13T08:20:15Z | - |
dc.date.available | 2017-07-13T08:20:15Z | - |
dc.date.issued | 2014-02 | - |
dc.identifier.other | 000000018070 | - |
dc.identifier.uri | https://hdl.handle.net/10371/119458 | - |
dc.description | 학위논문 (박사)-- 서울대학교 대학원 : 농생명공학부, 2014. 2. 황인규. | - |
dc.description.abstract | Bacterial leaf blight on rice, one of the most serious rice diseases, is caused by Xanthomonas oryzae pv. oryzae (Xoo). To determine roles of Xanthomonas outer proteins (Xop) in Xoo, I identified seven Xop homologs from the genome information of Xoo KXO85. The xopQKXO85, xopXKXO85, xopP2KXO85, xopP1KXO85, and xopNKXO85 were generated by EZ-Tn5 mutagenesis. Among the individual mutants, the xopP2KXO85, xopP1KXO85 and xopNKXO85 mutants exhibited significantly reduced virulence compared to the wild-type in the flag leaves of Dongjin. Interestingly, I did not see reduced virulence when the xopP2KXO85, xopP1KXO85 and xopNKXO85 mutants were inoculated into young leaves of the Dongjin. This indicated that Xop-mediated virulence is dependent on leaf stages in rice. To identify target proteins of XopNKXO85 in rice, I performed yeast two-hybrid screening. Two rice proteins, OsVOZ2 and putative thiamine synthase, appeared to interact with XopNKXO85 in yeast. This interaction was further confirmed by bimolecular fluorescence complementation and in vivo pull-down assays. OsVOZ2 is a hypothetical protein, and OsXNP is a putative thiamine synthase. To investigate roles of OsVOZ2 in interactions between rice and Xoo, I evaluated virulence of the wild-type and the xopNKXO85 mutant strain in the OsVOZ2 mutant rice generated by T-DNA insertion in Dongjin. Both the wild-type and the xopNKXO85 mutant were less virulent in the mutant rice than in the wild-type rice. Therefore, XopNKXO85 is a virulence factor that it plays an important role in the Xoo and rice interactions. | - |
dc.description.tableofcontents | ABSTRACT…………………………………………………………………. i
CONTENTS………………………………………………………………… iii LIST OF TABLES……………………………………………………….... v LIST OF FIGURES……………………………………………………..… vi The Type III Effector XopN of Xanthomonas oryzae pv. oryzae Targets OsVOZ2 and a Putative Thiamine Synthase in Rice ABSTRACT......................................................................................................2 INTRODUCTION............................................................................................4 MATERIALS AND METHODS.....................................................................8 I. Bacterial strains...............................................................................................8 II. Transposon insertion and marker-exchange mutagenesis...............................8 III. Virulence assay............................................................................................15 IV. Quantitative real time RT-PCR analysis………………………………...16 V. Adenylate cyclase assays.................……………………………………….16 VI. Yeast two-hybrid assay.................................…………………….……...18 VII. Agrobacterium-mediated transient expression................................……..20 VIII. In vivo pull-down assay…………………………………………….…21 IX. BiFC...........................……………………………………………………22 X. Localization analysis of OsVOZ2, OsXNP and XopNKXO85.........……..24 XI. Microscopy....................................………………………………………24 XII. Statistical analysis.........................………………………………………25 XIII. Ethics Statement...........................………………………………………25 RESULTS …………………………………………………………………...26 I. Mutagenesis of five xop genes in the Korean Xoo strain KXO85......………26 II. Expression of xopNKXO85 is regulated by HrpXKXO85...................................32 III. XopNKXO85 is a T3SS-dependent effector translocated into plant cells in the strain KXO85..................................................……………………..32 IV. Identification of XopNKXO85 targets in rice by yeast two-hybrid screening.....................................................................................................35 V. XopNKXO85 physically interacts with two rice proteins OsVOZ2 and OsXNP in planta.......................................................................................... 45 VI. Visualization and colocalization of the interactions between XopNKXO85 and OsVOZ2 and OsXNP.................................................................................48 VII. Subcellular localization of XopNKXO85, OsVOZ2, and OsXNP...…….48 VIII. Interactions between XopNKXO85 and OsVOZ2 are important for Xoo virulence in rice ..................................................……………………….51 DISCUSSION………………………………………………………………..59 LITERATURE CITED…………………………………………………….. 65 ABSTRACT IN KOREAN………………………………………………….77 | - |
dc.format | application/pdf | - |
dc.format.extent | 3251769 bytes | - |
dc.format.medium | application/pdf | - |
dc.language.iso | en | - |
dc.publisher | 서울대학교 대학원 | - |
dc.subject | Xanthomonas oryzae pv. oryzae | - |
dc.subject | xop genes | - |
dc.subject | type III secretion system | - |
dc.subject | yeast two-hybrid | - |
dc.subject | bimolecular fluorescence complementation | - |
dc.subject | pull-down assay | - |
dc.subject.ddc | 630 | - |
dc.title | (The) type III effector XopN of Xanthomonas oryzae pv. oryzae Targets OsVOZ2 and a putative thiamine synthase in rice | - |
dc.title.alternative | 벼흰잎마름병균이 분비하는 Type III Effector XopN과 벼의 단백질 OsVOZ2, Putative Thiamine Synthase의 상호작용 | - |
dc.type | Thesis | - |
dc.contributor.AlternativeAuthor | Hoon Cheong | - |
dc.description.degree | Doctor | - |
dc.citation.pages | vi, 81 | - |
dc.contributor.affiliation | 농업생명과학대학 농생명공학부 | - |
dc.date.awarded | 2014-02 | - |
- Appears in Collections:
- Files in This Item:
Item View & Download Count
Items in S-Space are protected by copyright, with all rights reserved, unless otherwise indicated.