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(The) type III effector XopN of Xanthomonas oryzae pv. oryzae Targets OsVOZ2 and a putative thiamine synthase in rice : 벼흰잎마름병균이 분비하는 Type III Effector XopN과 벼의 단백질 OsVOZ2, Putative Thiamine Synthase의 상호작용

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dc.contributor.advisor황인규-
dc.contributor.author정훈-
dc.date.accessioned2017-07-13T08:20:15Z-
dc.date.available2017-07-13T08:20:15Z-
dc.date.issued2014-02-
dc.identifier.other000000018070-
dc.identifier.urihttps://hdl.handle.net/10371/119458-
dc.description학위논문 (박사)-- 서울대학교 대학원 : 농생명공학부, 2014. 2. 황인규.-
dc.description.abstractBacterial leaf blight on rice, one of the most serious rice diseases, is caused by Xanthomonas oryzae pv. oryzae (Xoo). To determine roles of Xanthomonas outer proteins (Xop) in Xoo, I identified seven Xop homologs from the genome information of Xoo KXO85. The xopQKXO85, xopXKXO85, xopP2KXO85, xopP1KXO85, and xopNKXO85 were generated by EZ-Tn5 mutagenesis. Among the individual mutants, the xopP2KXO85, xopP1KXO85 and xopNKXO85 mutants exhibited significantly reduced virulence compared to the wild-type in the flag leaves of Dongjin. Interestingly, I did not see reduced virulence when the xopP2KXO85, xopP1KXO85 and xopNKXO85 mutants were inoculated into young leaves of the Dongjin. This indicated that Xop-mediated virulence is dependent on leaf stages in rice. To identify target proteins of XopNKXO85 in rice, I performed yeast two-hybrid screening. Two rice proteins, OsVOZ2 and putative thiamine synthase, appeared to interact with XopNKXO85 in yeast. This interaction was further confirmed by bimolecular fluorescence complementation and in vivo pull-down assays. OsVOZ2 is a hypothetical protein, and OsXNP is a putative thiamine synthase. To investigate roles of OsVOZ2 in interactions between rice and Xoo, I evaluated virulence of the wild-type and the xopNKXO85 mutant strain in the OsVOZ2 mutant rice generated by T-DNA insertion in Dongjin. Both the wild-type and the xopNKXO85 mutant were less virulent in the mutant rice than in the wild-type rice. Therefore, XopNKXO85 is a virulence factor that it plays an important role in the Xoo and rice interactions.-
dc.description.tableofcontentsABSTRACT…………………………………………………………………. i
CONTENTS………………………………………………………………… iii
LIST OF TABLES……………………………………………………….... v
LIST OF FIGURES……………………………………………………..… vi

The Type III Effector XopN of Xanthomonas oryzae pv. oryzae Targets OsVOZ2 and a Putative Thiamine Synthase in Rice

ABSTRACT......................................................................................................2
INTRODUCTION............................................................................................4
MATERIALS AND METHODS.....................................................................8
I. Bacterial strains...............................................................................................8
II. Transposon insertion and marker-exchange mutagenesis...............................8
III. Virulence assay............................................................................................15
IV. Quantitative real time RT-PCR analysis………………………………...16
V. Adenylate cyclase assays.................……………………………………….16
VI. Yeast two-hybrid assay.................................…………………….……...18
VII. Agrobacterium-mediated transient expression................................……..20
VIII. In vivo pull-down assay…………………………………………….…21
IX. BiFC...........................……………………………………………………22
X. Localization analysis of OsVOZ2, OsXNP and XopNKXO85.........……..24
XI. Microscopy....................................………………………………………24
XII. Statistical analysis.........................………………………………………25
XIII. Ethics Statement...........................………………………………………25
RESULTS …………………………………………………………………...26
I. Mutagenesis of five xop genes in the Korean Xoo strain KXO85......………26
II. Expression of xopNKXO85 is regulated by HrpXKXO85...................................32
III. XopNKXO85 is a T3SS-dependent effector translocated into plant cells
in the strain KXO85..................................................……………………..32

IV. Identification of XopNKXO85 targets in rice by yeast two-hybrid
screening.....................................................................................................35
V. XopNKXO85 physically interacts with two rice proteins OsVOZ2 and
OsXNP in planta.......................................................................................... 45
VI. Visualization and colocalization of the interactions between XopNKXO85
and OsVOZ2 and OsXNP.................................................................................48
VII. Subcellular localization of XopNKXO85, OsVOZ2, and OsXNP...…….48
VIII. Interactions between XopNKXO85 and OsVOZ2 are important for Xoo
virulence in rice ..................................................……………………….51
DISCUSSION………………………………………………………………..59
LITERATURE CITED…………………………………………………….. 65
ABSTRACT IN KOREAN………………………………………………….77
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dc.formatapplication/pdf-
dc.format.extent3251769 bytes-
dc.format.mediumapplication/pdf-
dc.language.isoen-
dc.publisher서울대학교 대학원-
dc.subjectXanthomonas oryzae pv. oryzae-
dc.subjectxop genes-
dc.subjecttype III secretion system-
dc.subjectyeast two-hybrid-
dc.subjectbimolecular fluorescence complementation-
dc.subjectpull-down assay-
dc.subject.ddc630-
dc.title(The) type III effector XopN of Xanthomonas oryzae pv. oryzae Targets OsVOZ2 and a putative thiamine synthase in rice-
dc.title.alternative벼흰잎마름병균이 분비하는 Type III Effector XopN과 벼의 단백질 OsVOZ2, Putative Thiamine Synthase의 상호작용-
dc.typeThesis-
dc.contributor.AlternativeAuthorHoon Cheong-
dc.description.degreeDoctor-
dc.citation.pagesvi, 81-
dc.contributor.affiliation농업생명과학대학 농생명공학부-
dc.date.awarded2014-02-
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