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Fluorescent Graphene Oxide-based Optical Biosensors for Detection of Disease-related Protease : 질병 관련 단백질 분해 효소 검출을 위한 형광성 산화 그라핀 기반의 광학 바이오센서 개발에 관한 연구

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dc.contributor.advisor이윤식-
dc.contributor.authorJin-Kyoung Yang-
dc.date.accessioned2017-07-13T08:46:12Z-
dc.date.available2017-07-13T08:46:12Z-
dc.date.issued2017-02-
dc.identifier.other000000141058-
dc.identifier.urihttps://hdl.handle.net/10371/119826-
dc.description학위논문 (박사)-- 서울대학교 대학원 : 화학생물공학부, 2017. 2. 이윤식.-
dc.description.abstractGraphene oxide (GO) have attracted considerable attention as a fluorescent probe for biosensors due to its unique and fascinating properties such as strong UV absorption, stable fluorescence in biological environment, and fluorescence quenching ability as well as preferential interaction with biomolecules. Although many attempts have shown promising results by using GO as a quencher for fluorescent dye in fluorescence resonance energy transfer (FRET) sensor, there are still several challenging issues including the use of unstable organic dyes. Therefore, various optical biosensors were designed by using GO as a fluorescent probe to enhance its performance for the detection of target biomolecule.
In the first part, GO PL-based optical biosensor consisting of a luminescent GO donor covalently linked with a peptide-quencher complex was described for a simple, rapid, and sensitive detection of proteases. To this end, the quenching efficiency of various candidate quenchers of GO fluorescence, such as metalloprotoporphyrins and QXL570, were examined and QXL570 was found to be much more effective for quenching the intrinsic fluorescence of GO than other charge transfer-based quenchers. The designed GO-peptide-QXL system was able to sensitively detect specific proteases, chymotrypsin and matrix metalloproteinase-2, via turn-on response of quenched GO fluorescence after proteolytic cleavage of the quencher. Finally, the GO–peptide–QXL hybrid successfully detected MMP-2 secreted from living cells, human hepatocytes HepG2, with high sensitivity.
In the second part, a new type of GO optical turn-on biosensor for the detection of MMP-2 was fabricated by means of of a peptide-induced assembly of fluorescent GO. Functionalization of GO with a peptide substrate for MMP-2 bearing a thiol group led to its self-assembly via disulfide bonding, accompanied by selfquenching of GOs fluorescence. This peptide-induced GO assembly was then disassembled by proteolytic cleavage in the presence of MMP-2, thereby restoring the level of self-quenched GO fluorescence. With this approach, we were able to detect MMP-2 and to investigate the kinetic parameters of MMP-2 activity. The GO–peptide assembly was successfully applied to the selective and sensitive detection of MMP-2 secreted by living cells, human hepatocytes HepG2, at a concentration of 2 ng mL−1.
In the third part, cysteine-modified GO (Cys-GO) doped with nitrogen and sulfur atoms was described. Cys-GO was simply synthesized by reacting with cysteine in the acidic water/dimethylformamide cosolvent system via ultra-sonication method under mild reaction conditions. The N and S contents in Cys-GO dramatically increased to 10.4 and 23.3 wt%. As-synthesized Cys-GO exhibited highly fluorescent properties compared to pristine GO, which could be attributed to the synergistic effective on radiative emission from heteroatoms of Cys-GO. Cys-GO was further found to be suitable as fluorescent probe for more sensitive detection of MMP-2.
These studies suggest that GO PL-based optical biosensors could be a promising platform for sensitive and selective biomolecule detection in the fields of medicine and pharmaceutical industry.
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dc.description.tableofcontentsChapter I. Introduction 1
1. Fluorescent Nanomaterials in Biosensing 2
2. Photoluminescence Properties of Graphenes 9
3. Optical Biosensors based on Graphene Materials 14
4. Research Objectives 19
Chapter II. Experiments 21
1. General 22
1.1 Chemicals and Materials 22
1.2 Instruments 25
2. Synthesis 27
2.1 Preparation of Peptides 27
2.2 Preparation of GO based Optical Sensors 28
Preparation of GO-Peptide-QXL 28
Preparation of GO-Peptide Assembly 30
Preparation of Cys-GO 32
Preparation of Cys-GO-Peptide Assembly 32
2.3 Screening of Effective Quencher for GO 34
2.4 Detection of Chymotrypsin and MMP-2 35
2.5 Kinetic Measurement of Chymotrypsin Activity 37
2.6 Kinetic Mearurement of MMP-2 Activity 38
2.7 Detection of MMP-2 Secreted from Living Cells 39
Chapter III. Results and Discussion 41
1. Fabrication of Luminescent GO with Peptide-Quencher Hybrids for MMP-2 Detection 42
1.1 Strategy for GO Based Protease Sensing 42
1.2 Study on Quenching of GO PL 45
1.3 Peptide Design for Chymotrypsin and MMP-2 Detection 53
1.4 GO-Peptide-QXL Hybrids for Optical Detection of Proteases 55
1.5 Detection of MMP-2 Secreted from Living Cells 72
1.6 Summary 77
2. Fabrication of Peptide-mediated GO Assemblies for Turn-on Fluorescence Sensing of MMP-2 77
2.1 Design of GO Assembly for MMP-2 Detection 77
2.2 GO-Peptide Assembly for Optical Detection of MMP-2 82
2.3 Kinetics of MMP-2 Detection by GO-P1 Assembly 98
2.4 Detection of MMP-2 Secreted from Living Cells 100
2.5 Summary 105
3. Fabrication of Cys-modified GO with Enhanced Fluorescence for Turn-on Fluorescence Detection of MMP-2 106
3.1 Preparation of Cys-GO 106
3.2 Characterization of Cys-GO 111
3.3 Optical Properties of Cys-GO 115
3.4 Structure of Cys-GO 121
3.5 Detection of MMP-2 132
3.6 Summary 138
4. Comparison of Sensing Performance 139
Chapter IV. Conclusion 143
References 147
Abstract in Korean 172
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dc.formatapplication/pdf-
dc.format.extent5674495 bytes-
dc.format.mediumapplication/pdf-
dc.language.isoko-
dc.publisher서울대학교 대학원-
dc.subjectGraphene oxide-
dc.subjectfluorescence nanomaterials-
dc.subjectfluorescence resonance energy transfer-
dc.subjectoptical biosensor-
dc.subjectmatrix metalloproteinase-2-
dc.subjectmolecule-induced assembly-
dc.subjectself-quenching-
dc.subjectN-
dc.subjectS-doped GO-
dc.subject.ddc660-
dc.titleFluorescent Graphene Oxide-based Optical Biosensors for Detection of Disease-related Protease-
dc.title.alternative질병 관련 단백질 분해 효소 검출을 위한 형광성 산화 그라핀 기반의 광학 바이오센서 개발에 관한 연구-
dc.typeThesis-
dc.contributor.AlternativeAuthor양진경-
dc.description.degreeDoctor-
dc.citation.pages175-
dc.contributor.affiliation공과대학 화학생물공학부-
dc.date.awarded2017-02-
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