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생쥐의 사지발생 과정에서 SWI/SNF 염색사 리모델링 복합체의 기능에 관한 연구 : Studies on the function of SWI/SNF chromatin remodeling complex during limb development

DC Field Value Language
dc.contributor.advisor성노현-
dc.contributor.author전신-
dc.date.accessioned2017-07-14T00:52:02Z-
dc.date.available2017-07-14T00:52:02Z-
dc.date.issued2016-02-
dc.identifier.other000000133822-
dc.identifier.urihttps://hdl.handle.net/10371/121443-
dc.description학위논문 (박사)-- 서울대학교 대학원 : 생명과학부, 2016. 2. 성노현.-
dc.description.abstractDuring development and differentiation, alterations in gene expression require modification of chromatin status, which allows or restrains the access of transcription factors to the regulatory elements. For developmental progression, the function of context-dependent transcription factors responding to developmental signals needs the recruitment of chromatin remodelers. Recent studies have identified the interlinked transcriptional networks by the enrichment of these factors in the genomic loci by using a limb bud, which is an excellent model to understand tissue patterning. Thus, the molecular circuits of regulators orchestrating limb development involve distinct functions of chromatin remodelers. The graded Sonic hedgehog (Shh) signaling governs the vertebrate limb skeletal patterning along anteroposterior (AP) axis by regulating the activity of bifunctional Gli transcriptional regulators acting as activator or repressor. Gli target genes are activated, repressed or derepressed in response to a gradient of Hedgehog (Hh) signaling, but the mechanisms by which bifunctional Gli proteins collaborate to regulate target genes are poorly understood. Furthermore, the genetic networks involved in limb patterning are well defined, whereas the epigenetic control of the process by chromatin remodelers remains unclear.
Here, I found that Srg3/mBaf155, a core subunit of SWI/SNF chromatin remodeling complex, is essential for Shh/Gli-driven limb AP skeletal patterning. Genetic analysis and spatiotemporal distributions of gene expression analyzed by whole-mount in situ hybridization have uncovered the dual requirements of SWI/SNF complex in Hh pathway during limb development. Specific inactivation of Srg3 in the limb bud mesenchyme hampered the transcriptional upregulation of both Shh receptor Ptch1 and its downstream effector Gli1 upon morphogen Shh stimulation and induced ectopic activation of Hh pathway in Shh-free region. In limb buds lacking Srg3, the attenuated sensing of Shh caused the redistribution of Shh-descendants as well as the downregulation of target genes. Without severe defects in the formation of signaling centers such as the zone of polarizing activity (ZPA) and the apical ectodermal ridge (AER), Srg3-deficient limb buds established the intact AP axis but progressively lost their anterior and posterior identities. Analysis of these progressive phenotypes provided genetic evidence how modulation of Shh responsiveness drives the fate of posterior limb skeletal progenitors and activation of ectopic Hh pathway is detrimental to the formation of anterior skeletal elements. Bifurcating role of Srg3 in Hh pathway distalized the distributions of epithelial-mesenchymal signaling components such as Shh, BMP antagonist Gremlin1 (Grem1) and FGF. Subsequently, Srg3 deficiency led to aberrant BMP activity and disruption of chondrogenic differentiation in zeugopod and autopod primordia. Notably, I found that Shh responsiveness and Gli repressor activity are collaboratively required for the spatiotemporal regulation of Grem1 expression, which affects the onset of digit chondrogenesis. My study uncovers the bifurcating function of SWI/SNF complex in Hh pathway to determine the fate of AP skeletal progenitors.
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dc.description.tableofcontentsI. Introduction 1
I-1. SWI/SNF chromatin remodeling complex 2
I-2. The roles of SWI/SNF complex during embryonic development 4
I-3. Vertebrate limb development 7
I-3-1. Function of Shh signal and its regulation in developing limb bud 8
I-3-2. The Hedgehog signaling pathway and function of GLI proteins 9
I-3-3. Interlinked signaling feedback loop between an epithelium and the adjacent mesenchyme 12

II. Materials and Methods 23

III. Results 32
Srg3 is essential for limb anteroposterior patterning 33
Srg3f/f
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dc.description.tableofcontentsPrx1-cre forelimb buds establish distinct Hh pathways in the anterior and posterior mesenchyme 39
Srg3-containing SWI/SNF complexes are required for transcriptional regulation of Gli1 and Ptch1 in developing limb buds 46
SWI/SNF complex also mediates Hh pathway in the AER 48
Mesenchymal Srg3-deficient forelimb buds lead to progressive loss of AP asymmetry 49
Mesenchymal Srg3 deficiency induces ectopic Shh expression and distalizes epithelial-mesenchymal signaling during progression of limb development 50
Disrupted BMP signaling and defective chondrogenesis in forelimb buds lacking mesenchymal Srg3 71
Bifurcating function of SWI/SNF complex in Hh pathway regulates the spatiotemporal expression of Grem1 73

IV. Discussion 86

V. References 93

국문 초록 112
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dc.formatapplication/pdf-
dc.format.extent20999100 bytes-
dc.format.mediumapplication/pdf-
dc.language.isoen-
dc.publisher서울대학교 대학원-
dc.subjectSWI/SNF-
dc.subjectSrg3-
dc.subjectlimb patterning-
dc.subjectHh pathway-
dc.subjectGrem1-
dc.subject.ddc570-
dc.title생쥐의 사지발생 과정에서 SWI/SNF 염색사 리모델링 복합체의 기능에 관한 연구-
dc.title.alternativeStudies on the function of SWI/SNF chromatin remodeling complex during limb development-
dc.typeThesis-
dc.description.degreeDoctor-
dc.citation.pages125-
dc.contributor.affiliation자연과학대학 생명과학부-
dc.date.awarded2016-02-
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