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Comparative metabolism of Bensulide by Soil fungus Cunninghamella elegans and Human liver microsome

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dc.contributor.advisor김정한-
dc.contributor.author황연진-
dc.date.accessioned2017-07-14T06:41:25Z-
dc.date.available2017-07-14T06:41:25Z-
dc.date.issued2014-02-
dc.identifier.other000000017793-
dc.identifier.urihttps://hdl.handle.net/10371/125844-
dc.description학위논문 (석사)-- 서울대학교 대학원 : 농생명공학부, 2014. 2. 김정한.-
dc.description.abstractBensulide [O-O-diisopropyl S-2-phenylsulfonylaminoethyl phosphoro -dithioate] is an organophosphorous herbicide, acting as a inhibitor of cell division in meristematic root tissues and seedling growth by conjugation of acetyl co-enzyme A. This study was performed to investigate in vitro metabolism of bensulide with soil fungi, Cunninghamella elegans(Cunn. elegans), human liver microsomes(HLMs) and characterize the specific isoforms of cytochrome P450 involved in metabolic reaction.

In the presence of Cunn. elegans, a well-known fungal species with its strong resemblance of the xenobiotic metabolism of the mammalian system, bensulide was biodegraded to its oxygen analog, bensulide oxon (N-[(2-(diisopropoxyphosphinoylthio-)-1-ethyl)]-benzenesulonamiade).
In sterilized Cunn. elegans, the metabolite did not form, indicating that Cunn. elegans metabolized bensulide. Bensulide degradation pattern showed that day 1 showed 5% of degradation, day 3, 89%, day 5, 99% and by day 7 bensulide in all three replicates degraded completely. By day 3 metabolite was detected.

With presense of NADPH, bensulide was metabolized by HLMs to give identical metabolite as microbial degradation, its oxygen analog, bensulide oxon. With boiled-denatured microsomes the metabolite did not form but with heat-denatured microsomes, the metabolite did form, indicating that metabolic enzymes are cytochrome P450s. In enzyme kinetic studies, Vmax(counts/min/mg protein) of 18.5, Km of 11.7 were obtained. A screen of 9 human cDNA-expressed CYP isoforms for metabolic ability with respect to the production of bensulide oxon demonstrated that 2 (CYP 3A4, CYP 2C19) CYP isoforms which are responsible for bensulide metabolism. Enzyme kinetics of those two CYP isoforms also demonstrated that CYP 3A4 has the highest affinity to bensulide.
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dc.description.tableofcontentsABSTRACT i
CONTENTS iii
LIST OF FIGURES vii
LIST OF TABLES x


I. INTRODUCTION 11
1. Metabolism of pesticides by soil fungi 12
1.1 Soil fungi 16
1.2 Cunninghamella elegans 17
2. Metabolism of xenobiotics (Biotransformation) 18
2.1. Cytochrome P450 19
2.2. Human liver microsomal CYP450 24
2.3. Recombinant human CYP450 29
3. Metabolism of pesticide in human liver microsomes 30
4. Bensulide 33
5. Purpose of the present study 34
II. MATERIALS AND METHODS 35
1. Materials and equipment 35
1.1. Chemicals and reagents 35
1.2. Cunninghamella elegans and incubation time 35
1.3. Human liver microsomes and cDNA-expressed CYP36
1.4. Analytical instrument and analytical conditions 38
1.4.1. HPLC 38
1.4.2 LC-MS 39
2. Method 40
2.1. Preparation of standard and calibration curves 40
2.2. Meatoblism of bensulide by Cunn. elegans 40
2.3. Fractionation of metabolite of bensulide 41
2.4. LC-MS 42
2.4.1. Optimization of 500-MS 42
2.4.2. Identification of fractionated metabolite of benusulide43
2.4.3. Turbo DDS 44
2.5. In vitro metabolism reaction of bensulide with HLMs and identification of major metabolite 44
2.6. Optimization of microsomal reaction conditions 45
2.6.1. Optimization of incubation time 45
2.6.2. Optimization of protein concentration 45
2.6.3. Optimization of bensulide concentration 46
2.7. Contribution of cDNA-expressed CYP isoforms on metabolism of bensulide 46
2.8. Metabolism with human cDNA-expressed CYP isoforms 46
2.9. Calculation of TNR (Total Normalized Rates) 47

III. RESULTS AND DISCUSSION 48
1. Metabolism of bensulide. 48
1.1.Calibration curve of bensulide 48
2. Metabolism of bensulide in reaction mixture 49
2.1. Analysis of metabolite of bensulide in reaction mixture 49
2.2. Identification of metabolites of bensulide in reaction mixture. 52
2.3. Identification of metabolites of bensulide and bensulide oxon by LC-MS 54
2.4. Optimization of metabolic reaction 61
2.4.1. Optimization of incubation time 61
2.4.2. Optimization of protein concentration 63
2.4.3. Optimization of bensulide concentration 64
3. Identification of the P450 isoforms involved in bensulide metabolism 70
4. Drug concentration dependent different formation of bensulide oxon. 72
5. TNR in in vitro metabolism 75
5.1 TNR for bensulide metabolism 75
Ⅳ. CONCLUSION 79

REFERENCES 80
국문 요약 88
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dc.formatapplication/pdf-
dc.format.extent1615032 bytes-
dc.format.mediumapplication/pdf-
dc.language.isoen-
dc.publisher서울대학교 대학원-
dc.subjectBensulide-
dc.subjectin vitro metabolism-
dc.subjectCunn. elegans-
dc.subjecthuman liver mirosomes-
dc.subjectcytochrome P450-
dc.subjectP450 isoforms-
dc.subjectenzyme kinetics-
dc.subject.ddc630-
dc.titleComparative metabolism of Bensulide by Soil fungus Cunninghamella elegans and Human liver microsome-
dc.typeThesis-
dc.description.degreeMaster-
dc.citation.pages89-
dc.contributor.affiliation농업생명과학대학 농생명공학부-
dc.date.awarded2014-02-
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