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Genome sequence of the organohalide-respiring Dehalogenimonas alkenigignens type strain (IP3-3(T))

Cited 9 time in Web of Science Cited 12 time in Scopus
Authors

Key, Trent A.; Richmond, Dray P.; Bowman, Kimberly S.; Cho, Yong-Joon; Chun, Jongsik; da Costa, Milton S.; Rainey, Fred A.; Moe, William M.

Issue Date
2016-06
Publisher
Michigan State University
Citation
Standards in Genomic Sciences, Vol.11, p. 44
Abstract
Dehalogenimonas alkenigignens IP3-3(T) is a strictly anaerobic, mesophilic, Gram negative staining bacterium that grows by organohalide respiration, coupling the oxidation of H-2 to the reductive dehalogenation of polychlorinated alkanes. Growth has not been observed with any non-polyhalogenated alkane electron acceptors. Here we describe the features of strain IP3-3(T) together with genome sequence information and its annotation. The 1,849,792 bp high-quality-draft genome contains 1936 predicted protein coding genes, 47 tRNA genes, a single large subunit rRNA (23S-5S) locus, and a single, orphan, small unit rRNA (16S) locus. The genome contains 29 predicted reductive dehalogenase genes, a large majority of which lack cognate genes encoding membrane anchoring proteins.
ISSN
1944-3277
URI
https://hdl.handle.net/10371/165740
DOI
https://doi.org/10.1186/s40793-016-0165-7
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