Publications

Detailed Information

Detoxification- and immune-related transcriptomic analysis of gills from bay scallops (Argopecten irradians) in response to algal toxin okadaic acid

Cited 27 time in Web of Science Cited 28 time in Scopus
Authors

Chi, Cheng; Giri, Sib Sankar; Jun, Jin Woo; Kim, Sang Wha; Kim, Hyoun Joong; Kang, Jeong Woo; Park, Se Chang

Issue Date
2018-08
Publisher
Multidisciplinary Digital Publishing Institute (MDPI)
Citation
Toxins, Vol.10 No.8, p. 308
Abstract
To reveal the molecular mechanisms triggered by okadaic acid (OA)-exposure in the detoxification and immune system of bay scallops, we studied differentially-expressed genes (DEGs) and the transcriptomic profile in bay scallop gill tissue after 48 h exposure to 500 nM of OA using the Illumina HiSeq 4000 deep-sequencing platform. De novo assembly of paired-end reads yielded 55,876 unigenes, of which 3204 and 2620 genes were found to be significantly up- or down-regulated, respectively. Gene ontology classification and enrichment analysis of the DEGs detected in bay scallops exposed to OA revealed four ontologies with particularly high functional enrichment, which were cellular process' (cellular component), metabolic process' (biological process), immune system process' (biological process), and catalytic process' (molecular function). The DEGs revealed that cyclic AMP-responsive element-binding proteins, acid phosphatase, toll-like receptors, nuclear erythroid 2-related factor, and the NADPH2 quinone reductase-related gene were upregulated. In contrast, the expression of some genes related to glutathione S-transferase 1, C-type lectin, complement C1q tumor necrosis factor-related protein, Superoxide dismutase 2 and fibrinogen C domain-containing protein, decreased. The outcomes of this study will be a valuable resource for the study of gene expression induced by marine toxins, and will help understanding of the molecular mechanisms underlying the scallops' response to OA exposure.
ISSN
2072-6651
URI
https://hdl.handle.net/10371/192524
DOI
https://doi.org/10.3390/toxins10080308
Files in This Item:
There are no files associated with this item.
Appears in Collections:

Related Researcher

  • College of Veterinary Medicine
  • Department of Veterinary Medicine
Research Area Bacteriophage Therapy, Veterinary Medicine, Veterinary Microbiology

Altmetrics

Item View & Download Count

  • mendeley

Items in S-Space are protected by copyright, with all rights reserved, unless otherwise indicated.

Share