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PhyloCSF plus plus : a fast and user-friendly implementation of PhyloCSF with annotation tools : PhyloCSF++: A fast and user-friendly implementation of PhyloCSF with annotation tools
| DC Field | Value | Language |
|---|---|---|
| dc.contributor.author | Pockrandt, Christopher | - |
| dc.contributor.author | Steinegger, Martin | - |
| dc.contributor.author | Salzberg, Steven L. | - |
| dc.date.accessioned | 2024-05-16T01:27:17Z | - |
| dc.date.available | 2024-05-16T01:27:17Z | - |
| dc.date.created | 2022-02-07 | - |
| dc.date.created | 2022-02-07 | - |
| dc.date.issued | 2022-02 | - |
| dc.identifier.citation | Bioinformatics, Vol.38 No.5, pp.1440-1442 | - |
| dc.identifier.issn | 1367-4803 | - |
| dc.identifier.uri | https://hdl.handle.net/10371/202536 | - |
| dc.description.abstract | PhyloCSF++ is an efficient and parallelized C++ implementation of the popular PhyIoCSF method to distinguish protein-coding and non-coding regions in a genome based on multiple sequence alignments (MSAs). It can score alignments or produce browser tracks for entire genomes in the wig file format. Additionally, PhyloCSF++ annotates coding sequences in GFF/GTF files using precomputed tracks or computes and scores MSAs on the fly with MMseqs2. | - |
| dc.language | 영어 | - |
| dc.publisher | Oxford University Press | - |
| dc.title | PhyloCSF plus plus : a fast and user-friendly implementation of PhyloCSF with annotation tools | - |
| dc.title.alternative | PhyloCSF++: A fast and user-friendly implementation of PhyloCSF with annotation tools | - |
| dc.type | Article | - |
| dc.identifier.doi | 10.1093/bioinformatics/btab756 | - |
| dc.citation.journaltitle | Bioinformatics | - |
| dc.identifier.wosid | 000776280200034 | - |
| dc.identifier.scopusid | 2-s2.0-85125572812 | - |
| dc.citation.endpage | 1442 | - |
| dc.citation.number | 5 | - |
| dc.citation.startpage | 1440 | - |
| dc.citation.volume | 38 | - |
| dc.description.isOpenAccess | Y | - |
| dc.contributor.affiliatedAuthor | Steinegger, Martin | - |
| dc.type.docType | Article | - |
| dc.description.journalClass | 1 | - |
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- College of Natural Sciences
- School of Biological Sciences
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