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Ancient dna study: Practical aspects
DC Field | Value | Language |
---|---|---|
dc.contributor.author | Jeong, Choongwon | - |
dc.date.accessioned | 2024-08-08T01:24:57Z | - |
dc.date.available | 2024-08-08T01:24:57Z | - |
dc.date.created | 2024-08-06 | - |
dc.date.created | 2024-08-06 | - |
dc.date.issued | 2021 | - |
dc.identifier.citation | The Handbook of Mummy Studies: New Frontiers in Scientific and Cultural Perspectives, pp.301-315 | - |
dc.identifier.uri | https://hdl.handle.net/10371/205834 | - |
dc.description.abstract | The introduction of next generation sequencing into archaeogenetics transformed the field into a powerhouse of the genetic study of human history. Although the processing of ancient DNA sequencing data follows the same basic principle for that of high-quality modern genomes, there are properties specific to ancient DNA molecules that need to be taken into account during data processing and analysis. In this chapter, I summarize the up-to-date practice of key steps of ancient DNA sequence data, such as the removal of Illumina sequencing adapter, read mapping to the reference genome, tabulation of post-mortem chemical damages, estimation of contamination level, and genotype calling. For each step, I highlight the current practices and the underlying logic for them, as well as directions of future method development. | - |
dc.language | 영어 | - |
dc.publisher | Springer Nature | - |
dc.title | Ancient dna study: Practical aspects | - |
dc.type | Article | - |
dc.identifier.doi | 10.1007/978-981-15-3354-9_11 | - |
dc.citation.journaltitle | The Handbook of Mummy Studies: New Frontiers in Scientific and Cultural Perspectives | - |
dc.identifier.scopusid | 2-s2.0-85175503725 | - |
dc.citation.endpage | 315 | - |
dc.citation.startpage | 301 | - |
dc.description.isOpenAccess | N | - |
dc.contributor.affiliatedAuthor | Jeong, Choongwon | - |
dc.type.docType | Book Chapter | - |
dc.description.journalClass | 1 | - |
dc.subject.keywordAuthor | Ancient dna | - |
dc.subject.keywordAuthor | Ancient genome data analysis | - |
dc.subject.keywordAuthor | Chemical damage | - |
dc.subject.keywordAuthor | Contamination estimation | - |
dc.subject.keywordAuthor | Mummy | - |
dc.subject.keywordAuthor | Next generation sequencing | - |
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