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Issue Date	Title / Author(s) / Citation	File
2023-01	LambdaPP: Fast and accessible protein-specific phenotype predictions Olenyi, Tobias; Marquet, Céline; Heinzinger, Michael; Kröger, Benjamin; Nikolova, Tiha; Bernhofer, Michael; Sändig, Philip; Schütze, Konstantin; Littmann, Maria; Mirdita, Milot; Steinegger, Martin; Dallago, Christian; Rost, Burkhard Protein Science, Vol.32 No.1, p. e4524	DOI
2023-01	UFCG: database of universal fungal core genes and pipeline for genome-wide phylogenetic analysis of fungi Kim, Dongwook; Gilchrist, Cameron L. M.; Chun, Jongsik; Steinegger, Martin Nucleic Acids Research, Vol.51 No.D1, pp.D777-D784	DOI
2022-12	Structure-guided isoform identification for the human transcriptome Sommer, Markus J.; Cha, Sooyoung; Varabyou, Ales; Rincon, Natalia; Park, Sukhwan; Minkin, Ilia; Pertea, Mihaela; Steinegger, Martin; Salzberg, Steven L. eLife, Vol.11	DOI
2022-12	Metagenome analysis using the Kraken software suite Lu, Jennifer; Rincon, Natalia; Wood, Derrick E.; Breitwieser, Florian P.; Pockrandt, Christopher; Langmead, Ben; Salzberg, Steven L.; Steinegger, Martin Nature Protocols, Vol.17 No.12, pp.2815-2839	DOI
2022-12	Endosomal lipid signaling reshapes the endoplasmic reticulum to control mitochondrial function Jang, Wonyul; Puchkov, Dmytro; Samso, Paula; Liang, YongTian; Nadler-Holly, Michal; Sigrist, Stephan J.; Kintscher, Ulrich; Liu, Fan; Mamchaoui, Kamel; Mouly, Vincent; Haucke, Volker SCIENCE, Vol.378 No.6625, pp.1188-+	DOI
2022-12	Phosphoinositides as membrane organizers Posor, York; Jang, Wonyul; Haucke, Volker NATURE REVIEWS MOLECULAR CELL BIOLOGY, Vol.23 No.12, pp.797-816	DOI
2022-12	A mannose-sensing AraC-type transcriptional activator regulates cell-cell aggregation of Vibrio cholerae Lee, Hye-Young; Yoon, Chang-Kyu; Cho, Yong-Joon; Lee, Jin-Woo; Lee, Kyung-Ah; Lee, Won-Jae; Seok, Yeong-Jae npj Biofilms and Microbiomes, Vol.8 No.1, p. 65	DOI
2022-12	Co-inhibition of ATM and ROCK synergistically improves cell proliferation in replicative senescence by activating FOXM1 and E2F1 Yang, Eun Jae; Park, Ji Hwan; Cho, Hyun-Ji; Hwang, Jeong-A; Woo, Seung-Hwa; Park, Chi Hyun; Kim, Sung Young; Park, Joon Tae; Park, Sang Chul; Hwang, Daehee; Lee, Young-Sam Communications Biology, Vol.5 No.1, p. 702	DOI
2022-12	Pancancer transcriptomic profiling identifies key PANoptosis markers as therapeutic targets for oncology Mall, Raghvendra; Bynigeri, Ratnakar R.; Karki, Rajendra; Malireddi, R. K. Subbarao; Sharma, Bhesh Raj; Kanneganti, Thirumala-Devi NAR Cancer, Vol.4 No.4, p. zcac033	DOI
2022-12	Structural visualization of the tubulin folding pathway directed by human chaperonin TRiC/CCT Gestaut, Daniel; Zhao, Yanyan; Park, Junsun; Ma, Boxue; Leitner, Alexander; Collier, Miranda; Pintilie, Grigore; Roh, Soung-Hun; Chiu, Wah; Frydman, Judith Cell, Vol.185 No.25, pp.4770-4787.e20	DOI
2022-12	Genomic detection of a secondary family burial in a single jar coffin in early Medieval Korea Lee, Don-Nyeong; Jeon, Chae Lin; Kang, Jiwon; Burri, Marta; Krause, Johannes; Woo, Eun Jin; Jeong, Choongwon American journal of biological anthropology, Vol.179 No.4, pp.585-597	DOI
2022-12	Biochemical characterization of the two novel mgCas12a proteins from the human gut metagenome Kim, Han Seong; Kim, Dong-wook; Kim, Sungjin; Choe, Sunghwa Scientific Reports, Vol.12 No.1, p. 20857	DOI
2022-11	Nearest neighbor search on embeddings rapidly identifies distant protein relations Schuetze, Konstantin; Heinzinger, Michael; Steinegger, Martin; Rost, Burkhard Frontiers in Bioinformatics, Vol.2, p. 1033775	DOI
2022-11	Functionalized and Biomimicked Carbon-Based Materials and Their Impact for Improving Surface Coatings for Protection and Functionality: Insights and Technological Trends Kumar, Aniket; Barik, Bapun; Jablonski, Piotr G.; Sonkaria, Sanjiv; Khare, Varsha Coatings, Vol.12 No.11, p. 1674	DOI
2022-11	Innate immunity, cytokine storm, and inflammatory cell death in COVID-19 Karki, Rajendra; Kanneganti, Thirumala-Devi Journal of Translational Medicine, Vol.20 No.1, p. 542	DOI
2022-11	Functional and molecular dissection of HCMV long non-coding RNAs Lee, Sungwon; Kim, Hyewon; Hong, Ari; Song, Jaewon; Lee, Sungyul; Kim, Myeonghwan; Hwang, Sung-yeon; Jeong, Dongjoon; Kim, Jeesoo; Son, Ahyeon; Lee, Young-suk; Kim, V. Narry; Kim, Jong-Seo; Chang, Hyeshik; Ahn, Kwangseog Scientific Reports, Vol.12 No.1, p. 19303	DOI
2022-11	Flavone-associated resistance of two <i>Lemna</i> species to duckweed weevil attack Lee, Gisuk; Choi, Hanyoung; Joo, Youngsung; Kim, Sang-Gyu ECOLOGY AND EVOLUTION, Vol.12 No.11	DOI
2022-11	Tolerogenic nanoparticles induce type II collagen–specific regulatory T cells and ameliorate osteoarthritis Sohn, Hee Su; Choi, Jeong Won; Jhun, JooYeon; Kwon, Sung Pil; Jung, Mungyo; Yong, Sangmin; Na, Hyun Sik; Kim, Jin-Hong; Cho, Mi-La; Kim, Byung Soo Science Advances, Vol.8 No.47, p. eabo5284	DOI
2022-10	Compositional Changes in the Gut Microbiota of Responders and Non-responders to Probiotic Treatment Among Patients With Diarrhea-predominant Irritable Bowel Syndrome: A Post Hoc Analysis of a Randomized Clinical Trial Shin, Seung Yong; Park, Sein; Moon, Jung Min; Kim, Kisung; Kim, Jeong Wook; Chun, Jong Sik; Lee, Tae Hee; Choi, Chang Hwan Journal of Neurogastroenterology and Motility (JNM), Vol.28 No.4, pp.642-654	DOI
2022-10	ProtTrans: Toward Understanding the Language of Life Through Self-Supervised Learning Elnaggar, Ahmed; Heinzinger, Michael; Dallago, Christian; Rehawi, Ghalia; Yu, Wang; Jones, Llion; Gibbs, Tom; Feher, Tamas; Angerer, Christoph; Steinegger, Martin; Bhowmik, Debsindhu; Rost, Burkhard IEEE Transactions on Pattern Analysis and Machine Intelligence, Vol.44 No.10, pp.7112-7127	DOI

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