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A novel c.-22T > C mutation in GALK1 promoter is associated with elevated galactokinase phenotype

Cited 2 time in Web of Science Cited 2 time in Scopus
Authors
Park, Hyung-Doo; Kim, Yoon-Kyoung; Park, Kyoung Un; Kim, Jin Q.; Song, Junghan; Song, Young-Han
Issue Date
2009-03-24
Publisher
BIOMED CENTRAL LTD
Citation
BMC MEDICAL GENETICS; Vol.10 ; -
Abstract
Background: Many genetic variations of GALK1 have been identified in the patients with galactokinase (GALK1) deficiency. However, the molecular characteristics of GALK1 in individuals with elevated GALK1 activity are relatively unknown. Methods: We investigated the relationship between elevated GALK1 activity and the molecular GALK1 gene variations, and the molecular mechanism underlying elevated GALK1 activity. PCR products from 63 subjects, without any attenuation of galactose degradation enzymes, were sequenced to screen for nucleotide alterations in the GALK1 promoter. Results: Three nucleotide substitutions were identified: c.-179A>G, c.-27A>C, and c.-22T>C. With respect to the c.-22T>C mutation, GALK1 activity in 13 subjects with the T/C or C/C genotype was significantly higher than those in 50 subjects with the T/T genotype ( =p < 0.001). The dual luciferase reporter assay in Hep3B cells showed that the luciferase activity with the GALK1 promoter with the c.-22C mutant allele increased approximately 2.5-fold, compared to that with the c.-22T. A specific DNA-protein complex was observed in an electrophoretic mobility shift assay, with slightly higher affinity to c.-22C than to c.-22T. Conclusion: The c.-22T>C mutation, which was observed frequently in individuals with elevated GALK1 activity, increased the expression of a reporter gene through enhanced binding of a currently unidentified nuclear protein. These results suggest that the elevated GALK1 activity resulted from enhanced gene expression, due to nucleotide variation within GALK1 promoter.
ISSN
1471-2350
Language
English
URI
http://hdl.handle.net/10371/76291
DOI
https://doi.org/10.1186/1471-2350-10-29
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College of Medicine/School of Medicine (의과대학/대학원)Laboratory Medicine (검사의학전공)Journal Papers (저널논문_검사의학전공)
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