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Showing results 1 to 60 of 101

Issue Date	Title / Author(s) / Citation	File
2006-04	Structural alignment of pseudoknotted RNA Dost, Banu; Han, Buhm; Zhang, Shaojie; Bafna, Vineet Lecture Notes in Computer Science, Vol.3909, pp.143-158	DOI
2008-06	Structural alignment of pseudoknotted RNA Han, Buhm; Dost, Banu; Bafna, Vineet; Zhang, Shaojie Journal of Computational Biology, Vol.15 No.5, pp.489-504	DOI
2008-09	Efficient Genome Wide Tagging by Reduction to SAT Choi, Arthur; Zaitlen, Noah; Han, Buhm; Pipatsrisawat, Knot; Darwiche, Adnan; Eskin, Eleazar Lecture Notes in Computer Science, Vol.5251, pp.135-147	DOI
2008-11	Efficient Association Study Design Via Power-Optimized Tag SNP Selection Han, B.; Kang, H. M.; Seo, M. S.; Zaitlen, N.; Eskin, E. Annals of Human Genetics, Vol.72 No.6, pp.834-847	DOI
2009-04	Rapid and Accurate Multiple Testing Correction and Power Estimation for Millions of Correlated Markers Han, Buhm; Kang, Hyun Min; Eskin, Eleazar PLoS Genetics, Vol.5 No.4, p. e1000456	DOI
2009-05	An Adaptive and Memory Efficient Algorithm for Genotype Imputation Kang, Hyun Min; Zaitlen, Noah A.; Han, Buhm; Eskin, Eleazar Lecture Notes in Computer Science, Vol.5541, pp.482-495	DOI
2010-07	Fine Mapping in 94 Inbred Mouse Strains Using a High-Density Haplotype Resource Kirby, Andrew; Kang, Hyun Min; Wade, Claire M.; Cotsapas, Chris; Kostem, Emrah; Han, Buhm; Furlotte, Nick; Kang, Eun Yong; Rivas, Manuel; Bogue, Molly A.; Frazer, Kelly A.; Johnson, Frank M.; Beilharz, Erica J.; Cox, David R.; Eskin, Eleazar; Daly, Mark J. Genetics, Vol.185 No.3, pp.1081-1095	DOI
2011-01	Postassociation Cleaning Using Linkage Disequilibrium Information Han, Buhm; Hackel, Brian M.; Eskin, Eleazar Genetic Epidemiology, Vol.35 No.1, pp.1-10	DOI
2011-03	Increasing Power of Groupwise Association Test with Likelihood Ratio Test Sul, Jae Hoon; Han, Buhm; Eskin, Eleazar Lecture Notes in Computer Science, Vol.6577, pp.452-467	DOI
2011-05	Random-Effects Model Aimed at Discovering Associations in Meta-Analysis of Genome-wide Association Studies Han, Buhm; Eskin, Eleazar American Journal of Human Genetics, Vol.88 No.5, pp.586-598	DOI
2011-05	An Optimal Weighted Aggregated Association Test for Identification of Rare Variants Involved in Common Diseases Sul, Jae Hoon; Han, Buhm; He, Dan; Eskin, Eleazar Genetics, Vol.188 No.1, pp.181-U298	DOI
2011-11	Increasing Power of Groupwise Association Test with Likelihood Ratio Test Sul, Jae Hoon; Han, Buhm; Eskin, Eleazar Journal of Computational Biology, Vol.18 No.11, pp.1611-1624	DOI
2012-03	Interpreting Meta-Analyses of Genome-Wide Association Studies Han, Buhm; Eskin, Eleazar PLoS Genetics, Vol.8 No.3, p. e1002555	DOI
2012-04	Hap-seq: An optimal algorithm for haplotype phasing with imputation using sequencing data He, Dan; Han, Buhm; Eskin, Eleazar Lecture Notes in Computer Science, Vol.7262, pp.64-78	DOI
2012-06	Incorporating prior information into association studies Darnell, Gregory; Duong, Dat; Han, Buhm; Eskin, Eleazar Bioinformatics, Vol.28 No.12, pp.I147-I153	DOI
2013-02	Hap-seq: An Optimal Algorithm for Haplotype Phasing with Imputation Using Sequencing Data He, Dan; Han, Buhm; Eskin, Eleazar Journal of Computational Biology, Vol.20 No.2, pp.80-92	DOI
2013-02	Chromatin marks identify critical cell types for fine mapping complex trait variants Trynka, Gosia; Sandor, Cynthia; Han, Buhm; Xu, Han; Stranger, Barbara E.; Liu, X. Shirley; Raychaudhuri, Soumya Nature Genetics, Vol.45, pp.124-130	DOI
2013-04	IPED: Inheritance path based pedigree reconstruction algorithm using genotype data He, Dan; Wang, Zhanyong; Han, Buhm; Parida, Laxmi; Eskin, Eleazar Lecture Notes in Computer Science, Vol.7821, pp.75-87	DOI
2013-06	Genome-wide association study of Tourette's syndrome Scharf, J. M.; Yu, D.; Mathews, C. A.; Neale, B. M.; Stewart, S. E.; Fagerness, J. A.; Evans, P.; Gamazon, E.; Edlund, C. K.; Service, S. K.; Tikhomirov, A.; Osiecki, L.; Illmann, C.; Pluzhnikov, A.; Konkashbaev, A.; Davis, L. K.; Han, B.; Crane, J.; Moorjani, P.; Crenshaw, A. T.; Parkin, M. A.; Reus, V. I.; Lowe, T. L.; Rangel-Lugo, M.; Chouinard, S.; Dion, Y.; Girard, S.; Cath, D. C.; Smit, J. H.; King, R. A.; Fernandez, T. V.; Leckman, J. F.; Kidd, K. K.; Kidd, J. R.; Pakstis, A. J.; State, M. W.; Herrera, L. D.; Romero, R.; Fournier, E.; Sandor, P.; Barr, C. L.; Phan, N.; Gross-Tsur, V.; Benarroch, F.; Pollak, Y.; Budman, C. L.; Bruun, R. D.; Erenberg, G.; Naarden, A. L.; Lee, P. C.; Weiss, N.; Kremeyer, B.; Berrio, G. B.; Campbell, D. D.; Cardona Silgado, J. C.; Ochoa, W. C.; Mesa Restrepo, S. C.; Muller, H.; Valencia Duarte, A. V.; Lyon, G. J.; Leppert, M.; Morgan, J.; Weiss, R.; Grados, M. A.; Anderson, K.; Davarya, S.; Singer, H.; Walkup, J.; Jankovic, J.; Tischfield, J. A.; Heiman, G. A.; Gilbert, D. L.; Hoekstra, P. J.; Robertson, M. M.; Kurlan, R.; Liu, C.; Gibbs, J. R.; Singleton, A.; Hardy, J.; Strengman, E.; Ophoff, R. A.; Wagner, M.; Moessner, R.; Mirel, D. B.; Posthuma, D.; Sabatti, C.; Eskin, E.; Conti, D. V.; Knowles, J. A.; Ruiz-Linares, A.; Rouleau, G. A.; Purcell, S.; Heutink, P.; Oostra, B. A.; McMahon, W. M.; Freimer, N. B.; Cox, N. J.; Pauls, D. L. Molecular Psychiatry, Vol.18, pp.721-728	DOI
2013-06	Imputing Amino Acid Polymorphisms in Human Leukocyte Antigens Jia, Xiaoming; Han, Buhm; Onengut-Gumuscu, Suna; Chen, Wei-Min; Concannon, Patrick J.; Rich, Stephen S.; Raychaudhuri, Soumya; de Bakker, Paul I. W. PLoS ONE, Vol.8 No.6, p. e64683	DOI
2013-06	Effectively Identifying eQTLs from Multiple Tissues by Combining Mixed Model and Meta-analytic Approaches Sul, Jae Hoon; Han, Buhm; Ye, Chun; Choi, Ted; Eskin, Eleazar PLoS Genetics, Vol.9 No.6, p. e1003491	DOI
2013-07	Rare Variant Association Testing Under Low-Coverage Sequencing Navon, Oron; Sul, Jae Hoon; Han, Buhm; Conde, Lucia; Bracci, Paige M.; Riby, Jacques; Skibola, Christine F.; Eskin, Eleazar; Halperin, Eran Genetics, Vol.194 No.3, pp.769-779	DOI
2013-10	IPED: Inheritance Path-based Pedigree Reconstruction Algorithm Using Genotype Data He, Dan; Wang, Zhanyong; Han, Buhm; Parida, Laxmi; Eskin, Eleazar Journal of Computational Biology, Vol.20 No.10, pp.780-791	DOI
2013-11	Application of user-guided automated cytometric data analysis to large-scale immunoprofiling of invariant natural killer T cells Hu, Xinli; Kim, Hyun; Brennan, Patrick J.; Han, Buhm; Baecher-Allan, Clare M.; De Jager, Philip L.; Brenner, Michael B.; Raychaudhuri, Soumya Proceedings of the National Academy of Sciences of the United States of America, Vol.110 No.47, pp.19030-19035	DOI
2014-01	Meta-Analysis Identifies Gene-by-Environment Interactions as Demonstrated in a Study of 4,965 Mice Kang, Eun Yong; Han, Buhm; Furlotte, Nicholas; Joo, Jong Wha J.; Shih, Diana; Davis, Richard C.; Lusis, Aldons J.; Eskin, Eleazar PLoS Genetics, Vol.10 No.1, p. e1004022	DOI
2014-01	Fast pairwise IBD association testing in genome-wide association studies Han, Buhm; Kang, Eun Yong; Raychaudhuri, Soumya; de Bakker, Paul I. W.; Eskin, Eleazar Bioinformatics, Vol.30 No.2, pp.206-213	DOI
2014-04	Fine Mapping Seronegative and Seropositive Rheumatoid Arthritis to Shared and Distinct HLA Alleles by Adjusting for the Effects of Heterogeneity Han, Buhm; Diogo, Dorothee; Eyre, Steve; Kallberg, Henrik; Zhernakova, Alexandra; Bowes, John; Padyukov, Leonid; Okada, Yukinori; Gonzalez-Gay, Miguel A.; Rantapaa-Dahlqvist, Solbritt; Martin, Javier; Huizinga, Tom W. J.; Plenge, Robert M.; Worthington, Jane; Gregersen, Peter K.; Klareskog, Lars; de Bakker, Paul I. W.; Raychaudhuri, Soumya American Journal of Human Genetics, Vol.94 No.4, pp.522-532	DOI
2014-04	Effectively identifying regulatory hotspots while capturing expression heterogeneity in gene expression studies Joo, Jong Wha J.; Sul, Jae Hoon; Han, Buhm; Ye, Chun; Eskin, Eleazar Genome Biology, Vol.15, p. r61	DOI
2014-08	Fine Mapping Major Histocompatibility Complex Associations in Psoriasis and Its Clinical Subtypes Okada, Yukinori; Han, Buhm; Tsoi, Lam C.; Stuart, Philip E.; Ellinghaus, Eva; Tejasvi, Trilokraj; Chandran, Vinod; Pellett, Fawnda; Pollock, Remy; Bowcock, Anne M.; Krueger, Gerald G.; Weichenthal, Michael; Voorhees, John J.; Rahman, Proton; Gregersen, Peter K.; Franke, Andre; Nair, Rajan P.; Abecasis, Goncalo R.; Gladman, Dafna D.; Elder, James T.; de Bakker, Paul I. W.; Raychaudhuri, Soumya American Journal of Human Genetics, Vol.95 No.2, pp.162-172	DOI
2014-12	Variation at HLA-DRB1 is associated with resistance to enteric fever Dunstan, Sarah J.; Nguyen Thi Hue; Buhm Han; Li, Zheng; Trinh Thi Bich Tram; Sim, Kar Seng; Parry, Christopher M.; Nguyen Tran Chinh; Ha Vinh; Nguyen Phu Huong Lan; Nga Tran Vu Thieu; Phat Voong Vinh; Koirala, Samir; Dongol, Sabina; Arjyal, Amit; Karkey, Abhilasha; Shilpakar, Olita; Dolecek, Christiane; Foo, Jia Nee; Le Thi Phuong; Mai Ngoc Lanh; Tan Do; Aung, Tin; Do Nu Hon; Teo, Yik Ying; Hibberd, Martin L.; Anders, Katherine L.; Okada, Yukinori; Raychaudhuri, Soumya; Simmons, Cameron P.; Baker, Stephen; de Bakker, Paul I. W.; Basnyat, Buddha; Tran Tinh Hien; Farrar, Jeremy J.; Khor, Chiea Chuen Nature Genetics, Vol.46, pp.1333-1336	DOI
2014-12	Risk for ACPA-positive rheumatoid arthritis is driven by shared HLA amino acid polymorphisms in Asian and European populations Okada, Yukinori; Kim, Kwangwoo; Han, Buhm; Pillai, Nisha E.; Ong, Rick T. -H.; Saw, Woei-Yuh; Luo, Ma; Jiang, Lei; Yin, Jian; Bang, So-Young; Lee, Hye-Soon; Brown, Matthew A.; Bae, Sang-Cheol; Xu, Huji; Teo, Yik-Ying; de Bakker, Paul I. W.; Raychaudhuri, Soumya Human Molecular Genetics, Vol.23 No.25, pp.6916-6926	DOI
2014-12	The HLA-DRβ1 amino acid positions 11–13–26 explain the majority of SLE–MHC associations Kim, Kwangwoo; Bang, So-Young; Lee, Hye-Soon; Okada, Yukinori; Han, Buhm; Saw, Woei-Yuh; Teo, Yik-Ying; Bae, Sang-Cheol Nature Communications, Vol.5, p. 5902	DOI
2015-01	A weighted genetic risk score using all known susceptibility variants to estimate rheumatoid arthritis risk Yarwood, Annie; Han, Buhm; Raychaudhuri, Soumya; Bowes, John; Lunt, Mark; Pappas, Dimitrios A.; Kremer, Joel; Greenberg, Jeffrey D.; Plenge, Robert; Worthington, Jane; Barton, Anne; Eyre, Steve Annals of the Rheumatic Diseases, Vol.74 No.1, pp.170-176	DOI
2015-04	Association of HLA-DRB1 Haplotypes With Rheumatoid Arthritis Severity, Mortality, and Treatment Response Viatte, Sebastien; Plant, Darren; Han, Buhm; Fu, Bo; Yarwood, Annie; Thomson, Wendy; Symmons, Deborah P. M.; Worthington, Jane; Young, Adam; Hyrich, Kimme L.; Morgan, Ann W.; Wilson, Anthony G.; Isaacs, John D.; Raychaudhuri, Soumya; Barton, Anne JAMA - Journal of the American Medical Association, Vol.313 No.16, pp.1645-1656	DOI
2015-06	Accurate and Fast Multiple-Testing Correction in eQTL Studies Sul, Jae Hoon; Raj, Towfique; de Jong, Simone; de Bakker, Paul I. W.; Raychaudhuri, Soumya; Ophoff, Roel A.; Stranger, Barbara E.; Eskin, Eleazar; Han, Buhm American Journal of Human Genetics, Vol.96 No.6, pp.857-868	DOI
2015-07	Disentangling the Effects of Colocalizing Genomic Annotations to Functionally Prioritize Non-coding Variants within Complex-Trait Loci Trynka, Gosia; Westra, Harm-Jan; Slowikowski, Kamil; Hu, Xinli; Xu, Han; Stranger, Barbara E.; Klein, Robert J.; Han, Buhm; Raychaudhuri, Soumya American Journal of Human Genetics, Vol.97 No.1, pp.139-152	DOI
2015-08	Additive and interaction effects at three amino acid positions in HLA-DQ and HLA-DR molecules drive type 1 diabetes risk Hu, Xinli; Deutsch, Aaron J.; Lenz, Tobias L.; Onengut-Gumuscu, Suna; Han, Buhm; Chen, Wei-Min; Howson, Joanna M. M.; Todd, John A.; De Bakker, Paul I. W.; Rich, Stephen S.; Raychaudhuri, Soumya Nature Genetics, Vol.47, pp.898-905	DOI
2015-09	Widespread non-additive and interaction effects within HLA loci modulate the risk of autoimmune diseases Lenz, Tobias L.; Deutsch, Aaron J.; Han, Buhm; Hu, Xinli; Okada, Yukinori; Eyre, Stephen; Knapp, Michael; Zhernakova, Alexandra; Huizinga, Tom W. J.; Abecasis, Goncalo; Becker, Jessica; Boeckxstaens, Guy E.; Chen, Wei-Min; Franke, Andre; Gladman, Dafna D.; Gockel, Ines; Gutierrez-Achury, Javier; Martin, Javier; Nair, Rajan P.; Noethen, Markus M.; Onengut-Gumuscu, Suna; Rahman, Proton; Rantapaa-Dahlqvist, Solbritt; Stuart, Philip E.; Tsoi, Lam C.; van Heel, David A.; Worthington, Jane; Wouters, Mira M.; Klareskog, Lars; Elder, James T.; Gregersen, Peter K.; Schumacher, Johannes; Rich, Stephen S.; Wijmenga, Cisca; Sunyaev, Shamil R.; de Bakker, Paul I. W.; Raychaudhuri, Soumya Nature Genetics, Vol.47, pp.1085-1090	DOI
2015-11	HLA-DRB1*11 and variants of the MHC class II locus are strong risk factors for systemic juvenile idiopathic arthritis Ombrello, Michael J.; Remmers, Elaine F.; Tachmazidou, Ioanna; Grom, Alexei; Foell, Dirk; Haas, Johannes-Peter; Martini, Alberto; Gattorno, Marco; Ozen, Seza; Prahalad, Sampath; Zeft, Andrew S.; Bohnsack, John F.; Mellins, Elizabeth D.; Ilowite, Norman T.; Russo, Ricardo; Len, Claudio; Hilario, Maria Odete E.; Oliveira, Sheila; Yeung, Rae S. M.; Rosenberg, Alan; Wedderburn, Lucy R.; Anton, Jordi; Schwarz, Tobias; Hinks, Anne; Bilginer, Yelda; Park, Jane; Cobb, Joanna; Satorius, Colleen L.; Han, Buhm; Baskin, Elizabeth; Signa, Sara; Duerr, Richard H.; Achkar, J. P.; Kamboh, M. Ilyas; Kaufman, Kenneth M.; Kottyan, Leah C.; Pinto, Dalila; Scherer, Stephen W.; Alarcon-Riquelme, Marta E.; Docampo, Elisa; Estivill, Xavier; Guel, Ahmet; de Bakker, Paul I. W.; Raychaudhuri, Soumya; Langefeld, Carl D.; Thompson, Susan; Zeggini, Eleftheria; Thomson, Wendy; Kastner, Daniel L.; Woo, Patricia Proceedings of the National Academy of Sciences of the United States of America, Vol.112 No.52, pp.15970-15975	DOI
2016-04	Multiple testing correction in linear mixed models Joo, Jong Wha J.; Hormozdiari, Farhad; Han, Buhm; Eskin, Eleazar Genome Biology, Vol.17, p. 62	DOI
2016-05	Analysis of five chronic inflammatory diseases identifies 27 new associations and highlights disease-specific patterns at shared loci Ellinghaus, David; Jostins, Luke; Spain, Sarah L.; Cortes, Adrian; Bethune, Joern; Han, Buhm; Park, Yu Rang; Raychaudhuri, Soumya; Pouget, Jennie G.; Huebenthal, Matthias; Folseraas, Trine; Wang, Yunpeng; Esko, Tonu; Metspalu, Andres; Westra, Harm-Jan; Franke, Lude; Pers, Tune H.; Weersma, Rinse K.; Collij, Valerie; D'Amato, Mauro; Halfvarson, Jonas; Jensen, Anders Boeck; Lieb, Wolfgang; Degenhardt, Franziska; Forstner, Andreas J.; Hofmann, Andrea; Schreiber, Stefan; Mrowietz, Ulrich; Juran, Brian D.; Lazaridis, Konstantinos N.; Brunak, Soren; Dale, Anders M.; Trembath, Richard C.; Weidinger, Stephan; Weichenthal, Michael; Ellinghaus, Eva; Elder, James T.; Barker, Jonathan N. W. N.; Andreassen, Ole A.; McGovern, Dermot P.; Karlsen, Tom H.; Barrett, Jeffrey C.; Parkes, Miles; Brown, Matthew A.; Franke, Andre Nature Genetics, Vol.48, pp.510-518	DOI
2016-05	A general framework for meta-analyzing dependent studies with overlapping subjects in association mapping Han, Buhm; Dat Duong; Sul, Jae Hoon; de Bakker, Paul I. W.; Eskin, Eleazar; Raychaudhuri, Soumya Human Molecular Genetics, Vol.25 No.9, pp.1857-1866	DOI
2016-06	Using genomic annotations increases statistical power to detect eGenes Duong, Dat; Zou, Jennifer; Hormozdiari, Farhad; Sul, Jae Hoon; Ernst, Jason; Han, Buhm; Eskin, Eleazar Bioinformatics, Vol.32 No.12, pp.156-163	DOI
2016-06	Investigating the Causal Relationship of C-Reactive Protein with 32 Complex Somatic and Psychiatric Outcomes: A Large-Scale Cross-Consortium Mendelian Randomization Study Prins, Bram. P.; Abbasi, Ali; Wong, Anson; Vaez, Ahmad; Nolte, Ilja; Franceschini, Nora; Stuart, Philip E.; Achury, Javier Guterriez; Mistry, Vanisha; Bradfield, Jonathan P.; Valdes, Ana M.; Bras, Jose; Shatunov, Aleksey; Lu, Chen; Han, Buhm; Raychaudhuri, Soumya; Bevan, Steve; Mayes, Maureen D.; Tsoi, Lam C.; Evangelou, Evangelos; Nair, Rajan P.; Grant, Struan F. A.; Polychronakos, Constantin; Radstake, Timothy R. D.; van Heel, David A.; Dunstan, Melanie L.; Wood, Nicholas W.; Al-Chalabi, Ammar; Dehghan, Abbas; Hakonarson, Hakon; Markus, Hugh S.; Elder, James T.; Knight, Jo; Arking, Dan E.; Spector, Timothy D.; Koeleman, Bobby P. C.; van Duijn, Cornelia M.; Martin, Javier; Morris, Andrew P.; Weersma, Rinse K.; Wijmenga, Cisca; Munroe, Patricia B.; Perry, John R. B.; Pouget, Jennie G.; Jamshidi, Yalda; Snieder, Harold; Alizadeh, Behrooz Z. PLoS Medicine, Vol.13 No.6, p. e1001976	DOI
2016-07	Shared Genetic Risk Factors of Intracranial, Abdominal, and Thoracic Aneurysms van't Hof, Femke N. G.; Ruigrok, Ynte M.; Lee, Cue Hyunkyu; Ripke, Stephan; Anderson, Graig; de Andrade, Mariza; Baas, Annette F.; Blankensteijn, Jan D.; Bottinger, Erwin P.; Bown, Matthew J.; Broderick, Joseph; Bijlenga, Philippe; Carrell, David S.; Crawford, Dana C.; Crosslin, David R.; Ebeling, Christian; Eriksson, Johan G.; Fornage, Myriam; Foroud, Tatiana; von und zu Fraunberg, Mikael; Friedrich, Christoph M.; Gaal, Emilia I.; Gottesman, Omri; Guo, Dong-Chuan; Harrison, Seamus C.; Hernesniemi, Juha; Hofman, Albert; Inoue, Ituro; Jaaskelainen, Juha E.; Jones, Gregory T.; Kiemeney, Lambertus A. L. M.; Kivisaari, Riku; Ko, Nerissa; Koskinen, Seppo; Kubo, Michiaki; Kullo, Iftikhar J.; Kuivaniemi, Helena; Kurki, Mitja I.; Laakso, Aki; Lai, Dongbing; Leal, Suzanne M.; Lehto, Hanna; LeMaire, Scott A.; Low, Siew-Kee; Malinowski, Jennifer; McCarty, Catherine A.; Milewicz, Dianna M.; Mosley, Thomas H.; Nakamura, Yusuke; Nakaoka, Hirofumi; Niemela, Mika; Pacheco, Jennifer; Peissig, Peggy L.; Pera, Joanna; Rasmussen-Torvik, Laura; Ritchie, Marylyn D.; Rivadeneira, Fernando; van Rij, Andre M.; Santos-Cortez, Regie Lyn P.; Saratzis, Athanasios; Slowik, Agnieszka; Takahashi, Atsushi; Tromp, Gerard; Uitterlinden, Andre G.; Verma, Shefali S.; Vermeulen, Sita H.; Wang, Gao T.; Han, Buhm; Rinkel, Gabriel J. E.; de Bakker, Paul I. W.; Aneurysm Consortium; Vascular Research Consortium Journal of the American Heart Association, Vol.5 No.7	DOI
2016-07	Imputing Phenotypes for Genome-wide Association Studies Hormozdiari, Farhad; Kang, Eun Yong; Bilow, Michael; Ben-David, Eyal; Vulpe, Chris; McLachlan, Stela; Lusis, Aldons J.; Han, Buhm; Eskin, Eleazar American Journal of Human Genetics, Vol.99 No.1, pp.89-103	DOI
2016-07	ForestPMPlot: A Flexible Tool for Visualizing Heterogeneity Between Studies in Meta-analysis Kang, Eun Yong; Park, Yurang; Li, Xiao; Segre, Ayellet V.; Han, Buhm; Eskin, Eleazar G3: Genes, Genomes, Genetics, Vol.6 No.7, pp.1793-1798	DOI
2016-07	A method to decipher pleiotropy by detecting underlying heterogeneity driven by hidden subgroups applied to autoimmune and neuropsychiatric diseases Han, Buhm; Pouget, Jennie G.; Slowikowski, Kamil; Stahl, Eli; Lee, Cue Hyunkyu; Diogo, Dorothee; Hu, Xinli; Park, Yu Rang; Kim, Eunji; Gregersen, Peter K.; Dahlqvist, Solbritt Rantapaa; Worthington, Jane; Martin, Javier; Eyre, Steve; Klareskog, Lars; Huizinga, Tom; Chen, Wei-Min; Onengut-Gumuscu, Suna; Rich, Stephen S.; Wray, Naomi R.; Raychaudhuri, Soumya Nature Genetics, Vol.48 No.7, pp.803-810	DOI
2016-09	Generation and molecular characterization of pancreatic cancer patient-derived xenografts reveals their heterologous nature Jung, Jaeyun; Lee, Hyun Cue; Seol, Hyang Sook; Choi, Yeon Sook; Kim, Eunji; Lee, Eun Ji; Rhee, Je-Keun; Singh, Shree Ram; Jun, Eun Sung; Han, Buhm; Hong, Seung Mo; Kim, Song Cheol; Chang, Suhwan Oncotarget, Vol.7 No.38, pp.62533-62546	DOI
2016-11	Discovering single nucleotide polymorphisms regulating human gene expression using allele specific expression from RNA-seq data Kang, Eun Yong; Martin, Lisa J.; Mangul, Serghei; Isvilanonda, Warin; Zou, Jennifer; Ben-David, Eyal; Han, Buhm; Lusis, Aldons J.; Shifman, Sagiv; Eskin, Eleazar Genetics, Vol.204 No.3, pp.1057-1064	DOI
2016-12	Identification of Loci at 1q21 and 16q23 That Affect Susceptibility to Inflammatory Bowel Disease in Koreans Yang, Suk-Kyun; Hong, Myunghee; Oh, Hyunjung; Low, Hui-Qi; Jung, Seulgi; Ahn, Seonjoo; Kim, Youngjin; Baek, Jiwon; Lee, Cue Hyunkyu; Kim, Eunji; Kim, Kyung Mo; Ye, Byong Duk; Kim, Kyung-Jo; Park, Sang Hyoung; Lee, Ho-Su; Lee, Inchul; Shin, Hyoung Doo; Han, Buhm; McGovern, Dermot P. B.; Liu, Jianjun; Song, Kyuyoung Gastroenterology, Vol.151 No.6, pp.1096-1099.e3	DOI
2017-04	Improving genetic diagnosis in Mendelian disease with transcriptome sequencing Cummings, Beryl B.; Marshall, Jamie L.; Tukiainen, Taru; Lek, Monkol; Donkervoort, Sandra; Foley, A. Reghan; Bolduc, Veronique; Waddell, Leigh B.; Sandaradura, Sarah A.; O'Grady, Gina L.; Estrella, Elicia; Reddy, Hemakumar M.; Zhao, Fengmei; Weisburd, Ben; Karczewski, Konrad J.; O'Donnell-Luria, Anne H.; Birnbaum, Daniel; Sarkozy, Anna; Hu, Ying; Gonorazky, Hernan; Claeys, Kristl; Joshi, Himanshu; Bournazos, Adam; Oates, Emily C.; Ghaoui, Roula; Davis, Mark R.; Laing, Nigel G.; Topf, Ana; Kang, Peter B.; Beggs, Alan H.; North, Kathryn N.; Straub, Volker; Dowling, James J.; Muntoni, Francesco; Clarke, Nigel F.; Cooper, Sandra T.; Bonnemann, Carsten G.; MacArthur, Daniel G.; GTEx Consortium; Han, Buhm Science Translational Medicine, Vol.9 No.386, p. eaal5209	DOI
2017-04	Fine-mapping the MHC locus in juvenile idiopathic arthritis (JIA) reveals genetic heterogeneity corresponding to distinct adult inflammatory arthritic diseases Hinks, A.; Bowes, J.; Cobb, J.; Ainsworth, H. C.; Marion, M. C.; Comeau, M. E.; Sudman, M.; Han, B.; Becker, M. L.; Bohnsack, J. F.; de Bakker, P. I. W.; Haas, J. P.; Hazen, M.; Lovell, D. J.; Nigrovic, P. A.; Nordal, E.; Punnaro, M.; Rosenberg, A. M.; Rygg, M.; Smith, S. L.; Wise, C. A.; Videm, V.; Wedderburn, L. R.; Yarwood, A.; Yeung, R. S. M.; Prahalad, S.; Langefeld, C. D.; Raychaudhuri, S.; Thompson, S. D.; Thomson, W. Annals of the Rheumatic Diseases, Vol.76 No.4, pp.765-772	DOI
2017-07	X chromosome-wide association study identifies a susceptibility locus for inflammatory bowel disease in Koreans Lee, Ho-Su; Oh, Hyunjung; Yang, Suk-Kyun; Baek, Jiwon; Jung, Seulgi; Hong, Myunghee; Kim, Kyung Mo; Shin, Hyoung Doo; Kim, Kyung-Jo; Park, Sang Hyoung; Ye, Byong Duk; Han, Buhm; Song, Kyuyoung Journal of Crohn's and Colitis, Vol.11 No.7, pp.820-830	DOI
2017-07	Applying meta-analysis to genotype-tissue expression data from multiple tissues to identify eQTLs and increase the number of eGenes Duong, Dat; Gai, Lisa; Snir, Sagi; Kang, Eun Yong; Han, Buhm; Sul, Jae Hoon; Eskin, Eleazar Bioinformatics, Vol.33 No.14, pp.i67-i74	DOI
2017-07	Increasing the power of meta-analysis of genome-wide association studies to detect heterogeneous effects Lee, C. H.; Eskin, E.; Han, B. Bioinformatics, Vol.33 No.14, pp.I379-I388	DOI
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2017-10	Dynamic landscape and regulation of RNA editing in mammals Tan, Meng How; Li, Qin; Shanmugam, Raghuvaran; Piskol, Robert; Kohler, Jennefer; Young, Amy N.; Liu, Kaiwen Ivy; Zhang, Rui; Amaswami, Gokul R.; Ariyoshi, Kentaro; Gupte, Ankita; Keegan, Liam P.; George, Cyril X.; Amu, Avinash R.; Huang, Ni; Pollina, Elizabeth A.; Leeman, Dena S.; Ustighi, Alessandra R.; Goh, Y. P. Sharon; Hawla, Ajay C.; Del Sal, Giannino; Peltz, Gary; Runet, Anne B.; Onrad, Donald F. C.; Samuel, Charles E. .; O'Connell, Mary A.; Walkley, Carl R. .; Nishikura, Kazuko; Li, Jin Billy; GTEx Consortium; Han, Buhm Nature, Vol.550 No.7675, pp.249-254	DOI
2017-10	Landscape of X chromosome inactivation across human tissues Tukiainen, Taru; Villani, Alexandra-Chloe; Yen, Angela; Rivas, Manuel A.; Marshall, Jamie L.; Satija, Rahul; Aguirre, Matt; Gauthier, Laura; Fleharty, Mark; Kirby, Andrew; Ummings, Beryl B. . C.; Astel, Stephane E. C.; Karczewski, Konrad J.; Aguet, Francois; Byrnes, Andrea; Lappalainen, Tuuli; Regev, Aviv; Ardlie, Kristin G.; Hacohen, Nir; MacArthur, Daniel G.; GTEx Consortium; Han, Buhm Nature, Vol.550 No.7675, pp.244-248	DOI
2017-10	The impact of rare variation on gene expression across tissues Li, Xin; Kim, Yungil; Sang, Emily K. T.; Davis, Joe R. .; Damani, Farhan N.; Hiang, Colby C.; Hess, Gaelen T. .; Zappala, Zachary; Strober, Benjamin J.; Scott, Alexandra J.; Li, Amy; Ganna, Andrea; Assik, Michael C. . B.; Merker, Jason D.; Hall, Ira M.; Attle, Alexis B.; Montgomery, Stephen B. .; GTEx Consortium; Han, Buhm Nature, Vol.550 No.7675, pp.239-243	DOI

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