S-Space College of Agriculture and Life Sciences (농업생명과학대학) Dept. of Food and Animal Biotechnology (식품·동물생명공학부) Journal Papers (저널논문_식품·동물생명공학부)
MPSS profiling of embryonic gonad and primordial germ cells in chicken
- Kim, Heebal; Park, Tae Sub; Lee, Woon Kyu; Moon, Sunjin; Kim, Jin Nam; Shin, Ji Hye; Jung, Jin Gyoung; Lee, Seon Duk; Park, Sang Hyun; Park, Kyung Je; Kim, Mi A; Shin, Sang Su; Kim, Tae Min; Nam, Jungrye; Kang, Yeonkyung; Lim, Jeong Mook; Han, Jae Yong
- Issue Date
- American Physiological Society
- Physiological Genomics, vol.29 no.3, pp. 253-259
- The massively parallel
signature sequencing (MPSS) provides a greater depth of coverage
than expressed sequence tag scan or microarray and provides a
comprehensive expression profile. We used the MPSS technology to
uncover gene expression profiling in the early embryonic gonads and
primordial germ cells (PGCs) in the chicken. Total numbers of
sequenced signatures were 1,012,533 and 995,676 for the PGCs and
gonad, respectively. Using a noise distribution model, we found that
1.67% of all signatures are expressed at a higher level in PCGs and
2.81% of all signatures are expressed at a higher level in the gonad.
The MPSS data are presented via an interactive web interface available
at http://snugenome.snu.ac.kr/MPSS. The MPSS data have been
submitted to the Gene Expression Omnibus of the National Center for
Biotechnology Information (accession number GSM137300 and
GSM137301 for PGCs and gonad, respectively).
massively parallel signature sequencing
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