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HATK: HLA analysis toolkit
Cited 11 time in
Web of Science
Cited 11 time in Scopus
- Authors
- Issue Date
- 2021-02
- Publisher
- Oxford University Press
- Citation
- Bioinformatics, Vol.37 No.3, pp.416-418
- Abstract
- Fine-mapping human leukocyte antigen (HLA) genes involved in disease susceptibility to individual alleles or amino acid residues has been challenging. Using information regarding HLA alleles obtained from HLA typing, HLA imputation or HLA inference, our software expands the alleles to amino acid sequences using the most recent IMGT/HLA database and prepares a dataset suitable for fine-mapping analysis. Our software also provides useful functionalities, such as various association tests, visualization tools and nomenclature conversion.
- ISSN
- 1367-4803
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