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Showing results 41 to 80 of 97

Issue Date	Title / Author(s) / Citation	File
2018-06	Clustering huge protein sequence sets in linear time Steinegger, Martin; Soeding, Johannes Nature Communications, Vol.9 No.1, p. 2542	DOI
2018-06	Guanylate binding proteins facilitate caspase-11-dependent pyroptosis in response to type 3 secretion system-negative Pseudomonas aeruginosa Balakrishnan, Arjun; Karki, Rajendra; Berwin, Brent; Yamamoto, Masahiro; Kanneganti, Thirumala-Devi Cell Death Discovery, Vol.4, p. 66	DOI
2018-10	Epigenetic reprogramming by histone acetyltransferase HAG1/AtGCN5 is required for pluripotency acquisition in Arabidopsis Kim, Ji-Yun; Yang, Woorim; Forner, Joachim; Lohmann, Jan U.; Noh, Bosl; Noh, Yoo-Sun EMBO Journal, Vol.37 No.20, p. e98726	DOI
2018-10	U-tail as a guardian against invading RNAs Yeo, Jinah; Kim, V. Narry Nature Structural and Molecular Biology, Vol.25 No.10, pp.903-905	DOI
2019-03	Small-molecule inhibitor of HIyU attenuates virulence of Vibrio species Lee, Zee-Won; Kim, Byoung Sik; Jang, Kyung Ku; Bang, Ye-Ji; Kim, Suhyeon; Ha, Nam-Chul; Jung, Young Hyun; Lee, Hyun Jik; Han, Ho Jae; Kim, Jong-Seo; Kim, Jeesoo; Sahu, Pramod K.; Jeong, Lak Shin; Kim, Myung Hee; Cho, Sang Ho Scientific Reports, Vol.9 No.1, p. 4346	DOI
2019-04	Diverging inflammasome signals in tumorigenesis and potential targeting Karki, Rajendra; Kanneganti, Thirumala-Devi Nature Reviews Cancer, Vol.19 No.4, pp.197-214	DOI
2019-04	Innate immune adaptor MyD88 deficiency prevents skin inflammation in SHARPIN-deficient mice Sharma, Bhesh Raj; Karki, Rajendra; Lee, Ein; Zhu, Qifan; Gurung, Prajwal; Kanneganti, Thirumala-Devi Cell Death and Differentiation, Vol.26 No.4, pp.741-750	DOI
2019-07	Protein-level assembly increases protein sequence recovery from metagenomic samples manyfold Steinegger, Martin; Mirdita, Milot; Soeding, Johannes Nature Methods, Vol.16 No.7, pp.603-609	DOI
2019-09	DDX3X acts as a live-or-die checkpoint in stressed cells by regulating NLRP3 inflammasome Samir, Parimal; Kesavardhana, Sannula; Patmore, Deanna M.; Gingras, Sebastien; Malireddi, R. K. Subbarao; Karki, Rajendra; Guy, Clifford S.; Briard, Benoit; Place, David E.; Bhattacharya, Anannya; Sharma, Bhesh Raj; Nourse, Amanda; King, Sharon V.; Pitre, Aaron; Burton, Amanda R.; Pelletier, Stephane; Gilbertson, Richard J.; Kanneganti, Thirumala-Devi Nature, Vol.573 No.7775, pp.590-594	DOI
2020-02	Characterization of intratissue bacterial communities and isolation of Escherichia coli from oral lichen planus lesions Baek, Keumjin; Lee, Jaewon; Lee, Ahreum; Lee, Junho; Yoon, Hye-Jung; Park, Hee Kyung; Chun, Jongsik; Choi, Youngnim Scientific Reports, Vol.10 No.1, p. 3495	DOI
2020-06	Viral hijacking of the TENT4-ZCCHC14 complex protects viral RNAs via mixed tailing Kim, Dongwan; Lee, Young-suk; Jung, Soo-Jin; Yeo, Jinah; Seo, Jenny J.; Lee, Young-Yoon; Lim, Jaechul; Chang, Hyeshik; Song, Jaewon; Yang, Jihye; Kim, Jong-Seo; Jung, Guhung; Ahn, Kwangseok; Kim, V. Narry Nature Structural and Molecular Biology, Vol.27 No.6, pp.581-588	DOI
2020-07	Chemical RNA digestion enables robust RNA-binding site mapping at single amino acid resolution Bae, Jong Woo; Kwon, S. Chul; Na, Yongwoo; Kim, V. Narry; Kim, Jong-Seo Nature Structural and Molecular Biology, Vol.27 No.7, pp.678-682	DOI
2020-08	A glycoprotein B-neutralizing antibody structure at 2.8 Å uncovers a critical domain for herpesvirus fusion initiation Oliver, Stefan L.; Xing, Yi; Chen, Dong-Hua; Roh, Soung Hun; Pintilie, Grigore D.; Bushnell, David A.; Sommer, Marvin H.; Yang, Edward; Carfi, Andrea; Chiu, Wah; Arvin, Ann M. Nature Communications, Vol.11 No.1	DOI
2020-09	A tale of non-canonical tails: gene regulation by post-transcriptional RNA tailing Yu, Sha; Kim, V. Narry Nature Reviews Molecular Cell Biology, Vol.21 No.9, pp.542-556	DOI
2020-10	Sclerostin inhibits Wnt signaling through tandem interaction with two LRP6 ectodomains Kim, Jinuk; Han, Wonhee; Park, Taeyong; Kim, Eun Jin; Bang, Injin; Lee, Hyun Sik; Jeong, Yejing; Roh, Kyeonghwan; Kim, Jeesoo; Kim, Jong-Seo; Kang, Chanhee; Seok, Chaok; Han, Jin-Kwan; Choi, Hee-Jung Nature Communications, Vol.11 No.1, p. 5357	DOI
2020-10	Network-based machine learning in colorectal and bladder organoid models predicts anti-cancer drug efficacy in patients Kong, JungHo; Lee, Heetak; Kim, Donghyo; Han, Seong Kyu; Ha, Doyeon; Shin, Kunyoo; Kim, Sanguk Nature Communications, Vol.11, p. 5485	DOI
2020-10	Comparative analysis of the tonsillar microbiota in IgA nephropathy and other glomerular diseases Park, Ji In; Kim, Tae-Yoon; Oh, Bumjo; Cho, Hyunjeong; Kim, Ji Eun; Yoo, Seong Ho; Lee, Jung Pyo; Kim, Yon Su; Chun, Jongsik; Kim, Bong-Soo; Lee, Hajeong Scientific Reports, Vol.10 No.1, p. 16206	DOI
2020-12	Emotional well-being and gut microbiome profiles by enterotype Lee, Sung-Ha; Yoon, Seok-Hwan; Jung, Yeonjae; Kim, Namil; Min, Uigi; Chun, Jongsik; Choi, Incheol Scientific Reports, Vol.10 No.1, p. 20736	DOI
2020-12	Quantification of purified endogenous miRNAs with high sensitivity and specificity Shin, Soochul; Jung, Yoonseok; Uhm, Heesoo; Song, Minseok; Son, Soomin; Goo, Jiyoung; Jeong, Cherlhyun; Song, Ji-Joon; Kim, V. Narry; Hohng, Sungchul Nature Communications, Vol.11 No.1, p. 6033	DOI
2020-12	Galactosaminogalactan activates the inflammasome to provide host protection Briard, Benoit; Fontaine, Thierry; Samir, Parimal; Place, David E.; Muszkieta, Laetitia; Malireddi, R. K. Subbarao; Karki, Rajendra; Christgen, Shelbi; Bomme, Perrine; Vogel, Peter; Beau, Remi; Mellado, Emilia; Ibrahim-Granet, Oumaima; Henrissat, Bernard; Kalathur, Ravi C.; Robinson, Cam; Latge, Jean-Paul; Kanneganti, Thirumala-Devi Nature, Vol.588 No.7839, pp.688-692	DOI
2021-02	Telomeres reforged with non-telomeric sequences in mouse embryonic stem cells Kim, Chuna; Sung, Sanghyun; Kim, Jong-Seo; Lee, Hyunji; Jung, Yoonseok; Shin, Sanghee; Kim, Eunkyeong; Seo, Jenny J.; Kim, Jun; Kim, Daeun; Niida, Hiroyuki; Kim, V. Narry; Park, Daechan; Lee, Junho Nature Communications, Vol.12 No.1, p. 1097	DOI
2021-02	Improved protein structure refinement guided by deep learning based accuracy estimation Hiranuma, Naozumi; Park, Hahnbeom; Baek, Minkyung; Anishchenko, Ivan; Dauparas, Justas; Baker, David Nature Communications, Vol.12, p. 1340	DOI
2021-02	L1 retrotransposons exploit RNA m(6)A modification as an evolutionary driving force Hwang, Sung-Yeon; Jung, Hyunchul; Mun, Seyoung; Lee, Sungwon; Park, Kiwon; Baek, S. Chan; Moon, Hyungseok C.; Kim, Hyewon; Kim, Baekgyu; Choi, Yongkuk; Go, Young-Hyun; Tang, Wanxiangfu; Choi, Jongsu; Choi, Jung Kyoon; Cha, Hyuk-Jin; Park, Hye Yoon; Liang, Ping; Kim, V. Narry; Han, Kyudong; Ahn, Kwangseog Nature Communications, Vol.12 No.1, p. 880	DOI
2021-03	UXT chaperone prevents proteotoxicity by acting as an autophagy adaptor for p62-dependent aggrephagy Yoon, Min Ji; Choi, Boyoon; Kim, Eun Jin; Ohk, Jiyeon; Yang, Chansik; Choi, Yeon-Gil; Lee, Jinyoung; Kang, Chanhee; Song, Hyun Kyu; Kim, Yoon Ki; Woo, Jae-Sung; Cho, Yongcheol; Choi, Eui-Ju; Jung, Hosung; Kim, Chungho Nature Communications, Vol.12 No.1, p. 1955	DOI
2021-06	Highly multiplexed oligonucleotide probe-ligation testing enables efficient extraction-free SARS-CoV-2 detection and viral genotyping Credle, Joel J.; Robinson, Matthew L.; Gunn, Jonathan; Monaco, Daniel; Sie, Brandon; Tchir, Alexandra; Hardick, Justin; Zheng, Xuwen; Shaw-Saliba, Kathryn; Rothman, Richard E.; Eshleman, Susan H.; Pekosz, Andrew; Hansen, Kasper; Mostafa, Heba; Steinegger, Martin; Larman, H. Benjamin Modern Pathology, Vol.34 No.6, pp.1093-1103	DOI
2021-07	Ets-2 deletion in myeloid cells attenuates IL-1α-mediated inflammatory disease caused by a Ptpn6 point mutation Tartey, Sarang; Gurung, Prajwal; Karki, Rajendra; Burton, Amanda; Hertzog, Paul; Kanneganti, Thirumala-Devi Cellular and Molecular Immunology, Vol.18 No.7, pp.1798-1808	DOI
2021-07	TLR2 senses the SARS-CoV-2 envelope protein to produce inflammatory cytokines Zheng, Min; Karki, Rajendra; Williams, Evan Peter; Yang, Dong; Fitzpatrick, Elizabeth; Vogel, Peter; Jonsson, Colleen Beth; Kanneganti, Thirumala-Devi Nature Immunology, Vol.22 No.7, pp.829-838	DOI
2021-08	Highly accurate protein structure prediction with AlphaFold Jumper, John; Evans, Richard; Pritzel, Alexander; Green, Tim; Figurnov, Michael; Ronneberger, Olaf; Tunyasuvunakool, Kathryn; Bates, Russ; Žídek, Augustin; Potapenko, Anna; Bridgland, Alex; Meyer, Clemens; Kohl, Simon A. A.; Ballard, Andrew J.; Cowie, Andrew; Romera-Paredes, Bernardino; Nikolov, Stanislav; Jain, Rishub; Adler, Jonas; Back, Trevor; Petersen, Stig; Reiman, David; Clancy, Ellen; Zielinski, Michal; Steinegger, Martin; Pacholska, Michalina; Berghammer, Tamas; Bodenstein, Sebastian; Silver, David; Vinyals, Oriol; Senior, Andrew W.; Kavukcuoglu, Koray; Kohli, Pushmeet; Hassabis, Demis Nature, Vol.596 No.7873, pp.583-589	DOI
2021-08	The regulatory impact of RNA-binding proteins on microRNA targeting Kim, Sukjun; Kim, Soyoung; Chang, Hee Ryung; Kim, Doyeon; Park, Junehee; Son, Narae; Park, Joori; Yoon, Minhyuk; Chae, Gwangung; Kim, Young-Kook; Kim, V. Narry; Kim, Yoon Ki; Nam, Jin-Wu; Shin, Chanseok; Baek, Daehyun Nature Communications, Vol.12 No.1, p. 5057	DOI
2021-09	Dynamic tracking and identification of tissue-specific secretory proteins in the circulation of live mice Kim, Kwang-eun; Park, Isaac; Kim, Jeesoo; Kang, Myeong-Gyun; Choi, Won Gun; Shin, Hyemi; Kim, Jong-Seo; Rhee, Hyun-Woo; Suh, Jae Myoung Nature Communications, Vol.12 No.1, p. 5204	DOI
2021-09	AIM2 forms a complex with pyrin and ZBP1 to drive PANoptosis and host defence Lee, SangJoon; Karki, Rajendra; Wang, Yaqiu; Nguyen, Lam Nhat; Kalathur, Ravi C.; Kanneganti, Thirumala-Devi Nature, Vol.597 No.7876, pp.415-419	DOI
2021-10	Photoactivatable ribonucleosides mark base-specific RNA-binding sites Bae, Jong Woo; Kim, Sangtae; Kim, V. Narry; Kim, Jong-Seo Nature Communications, Vol.12 No.1, p. 6026	DOI
2022-01	BAP1 shapes the bone marrow niche for lymphopoiesis by fine-tuning epigenetic profiles in endosteal mesenchymal stromal cells Jeong, Jinguk; Jung, Inkyung; Kim, Ji-Hoon; Jeon, Shin; Hyeon, Do Young; Min, Hyungyu; Kang, Byeonggeun; Nah, Jinwoo; Hwang, Daehee; Um, Soo-Jong; Ko, Myunggon; Seong, Rho Hyun Cell Death and Differentiation, p. s41418	DOI
2022-02	Oxidative stress protein Oxr1 promotes V-ATPase holoenzyme disassembly in catalytic activity-independent manner Khan, Md. Murad; Lee, Seowon; Couoh-Cardel, Sergio; Oot, Rebecca A; Kim, Hyunmin; Wilkens, Stephan; Roh, Soung-Hun EMBO Journal, Vol.41 No.3, p. e109360	DOI
2022-03	Molecular evidence for natural hybridization between Rumex crispus and R. obtusifolius (Polygonaceae) in Korea Bhandari, Gauri Shankar; Park, Chong-Wook Scientific Reports, Vol.12 No.1, p. 5423	DOI
2022-04	Reformulation of Trivers-Willard hypothesis for parental investment Choi, Jibeom; Roh, Hyungmin; Lee, Sang-im; Kwon, Hee-Dae; Kang, Myungjoo; Jablonski, Piotr G. Communications Biology, Vol.5 No.1	DOI
2022-05	Functional role of the Frizzled linker domain in the Wnt signaling pathway Ko, Seung-Bum; Mihara, Emiko; Park, Yedarm; Roh, Kyeonghwan; Kang, Chanhee; Takagi, Junichi; Bang, Injin; Choi, Hee-Jung Communications Biology, Vol.5 No.1	DOI
2022-06	ColabFold: making protein folding accessible to all Mirdita, Milot; Schutze, Konstantin; Moriwaki, Yoshitaka; Heo, Lim; Ovchinnikov, Sergey; Steinegger, Martin Nature Methods, Vol.19 No.6, pp.679-682	DOI
2022-06	Adipocyte HIF2α functions as a thermostat via PKA Cα regulation in beige adipocytes Han, Ji Seul; Jeon, Yong Geun; Oh, Minsik; Lee, Gung; Nahmgoong, Hahn; Han, Sang Mun; Choi, Jeehye; Kim, Ye Young; Shin, Kyung Cheul; Kim, Jiwon; Jo, Kyuri; Choe, Sung Sik; Park, Eun Jung; Kim, Sun; Kim, Jae Bum Nature Communications, Vol.13 No.1, p. 3268	DOI
2022-06	Network-based machine learning approach to predict immunotherapy response in cancer patients Kong, JungHo; Ha, Doyeon; Lee, Juhun; Kim, Inhae; Park, Minhyuk; Im, Sin-Hyeog; Shin, Kunyoo; Kim, Sanguk Nature Communications, Vol.13, p. 3703	DOI

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