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Showing results 1 to 52 of 52

Issue Date	Title / Author(s) / Citation	File
2005	Proteome analysis of chicken embryonic gonads: Identification of major proteins from cultured gonadal primordial germ cells Han, Beom Ku; Kim, Jin Nam; Shin, Ji Hye; Kim, Jin-Kyoo; Jo, Do Hyun; Kim, Heebal; Han, Jae Yong Molecular Reproduction and Development, vol.72 no.4, pp. 521-529	DOI
2006	ChickGCE: A novel germ cell EST database for studying the early developmental stage in chickens Kim, Heebal; Lim, Dajeong; Han, Beom Ku; Sung, Samsun; Jeon, Mina; Moon, Sunjin; Kang, Yeonkyung; Nam, Jungrye; Han, Jae Yong Genomics, vol.88 no.2, pp. 252-257	DOI
2006	Gene expression profiling of chicken primordial germ cell ESTs Han, Jae Yong; Park, Tae Sub; Kim, Jin Nam; Kim, Mi A; Lim, Dajeong; Lim, Jeong Mook; Kim, Heebal BMC Genomics, vol.30 no.7, 220-225	view file DOI
2006-02	Generation and analysis of large-scale expressed sequence tags (ESTs) from a full-length enriched cDNA library of porcine backfat tissue Kim, Tae-Hun; Kim, Nam-Soon; Lim, Dajeong; Lee, Kyung-Tai; Oh, Jung-Hwa; Park, Hye-Sook; Jang, Gil-Won; Kim, Hyung-Yong; Jeon, Mina; Choi, Bong-Hwan; Lee, Hae-Young; Chung, HY; Kim, Heebal BMC Genomics, 7(1):36	view file DOI
2007	MPSS profiling of embryonic gonad and primordial germ cells in chicken Kim, Heebal; Park, Tae Sub; Lee, Woon Kyu; Moon, Sunjin; Kim, Jin Nam; Shin, Ji Hye; Jung, Jin Gyoung; Lee, Seon Duk; Park, Sang Hyun; Park, Kyung Je; Kim, Mi A; Shin, Sang Su; Kim, Tae Min; Nam, Jungrye; Kang, Yeonkyung; Lim, Jeong Mook; Han, Jae Yong Physiological Genomics, vol.29 no.3, pp. 253-259	DOI
2007	Identification of breed-specific DNA polymorphisms for a simple and unambiguous screening system in germline chimeric chickens Choi, Jin Won; Lee, Eun Young; Shin, Ji Hye; Zheng, Yinghui; Cho, Byung Wook; Kim, Jin-Kyoo; Kim, Heebal; Han, Jae Yong Journal of Experimental Zoology Part A: Ecological Genetics and Physiology, 307A, pp. 241-248	DOI
2007	A set of stage-specific gene trans identified in EK stage X and HH stage 3 chick embryos. Lee, Bo Ram; Kim, Heebal; Park, Tae Sub; Moon, Sunjin; Cho, Seoae; Park, Taesung; Lim, Jeong Mook; Han, Jae Yong BMC Developmental Biology, 7: 60	view file DOI
2008	Identification and gene expression profiling of the Pum1 and Pum2 members of the Pumilio family in the chicken Lee, Jee Young; Lim, Jeong Mook; Kim, Duk Kyung; Zheng, Ying Hui; Moon, Sunjin; Han, Beom Ku; Song, Ki Duk; Kim, Heebal; Han, Jae Yong Molecular Reproduction and Development, vol.75 no.1, pp. 184-190	DOI
2008	Testis-specific novel transcripts in chicken: In situ localization and expression pattern profiling during sexual development Rengaraj, Deivendran; Kim, Duk Kyung; Zheng, Ying Hui; Lee, Sang In; Kim, Heebal; Han, Jae Yong Biology of Reproduction, vol.79 no.3, pp. 413-420	link
2008	Reproduction of Wild Birds via Interspecies Germ Cell Transplantation Kang, Seok Jin; Choi, Jin Won; Kim, Sun Young; Park, Kyung Je; Kim, Tae Min; Lee, Young Mok; Kim, Heebal; Lim, Jeong Mook; Han, Jae Yong Biology of Reproduction, vol.79 no.5, pp. 931-937	DOI
2008	Generation of transgenic quail through germ cell-mediated germline transmission Shin, Sang Su; Kim, Tae Min; Kim, Sun Young; Kim, Tae Wan; Seo, Hee Won; Lee, Seul Ki; Kwon, Se Chang; Lee, Gwan Sun; Kim, Heebal; Lim, Jeong Mook; Han, Jae Yong FASEB Journal, vol.22 no.7, pp. 2435-2444	DOI
2008	An approach of orthology detection from homologous sequences under minimum evolution Kim, Kyung Mo; Sung, Samsun; Caetano-Anolle´ s, Gustavo; Han, Jae Yong; Kim, Heebal Nucleic Acids Research, vol.36 no.17, e110	view file DOI
2009	Identification of the Major Proteins Produced by Cultured Germline Stem Cells in Chicken Han, Beom Ku; Jung, Jin Gyoung; Nam, Jungrye; Moon, Jong Kook; Kim, Jin Nam; Lee, Sang In; Kim, Jin Kyoo; Kim, Heebal; Han, Jae Yong Journal of Andrology, vol.30 no.6, pp. 690-702	DOI
2012	Gene expression profile of human peripheral b 1 lood mononuclear cells induced by 2 Staphylococcus aureus lipoteichoic acid Kang, Seok-Seong; Kim, Hye Jin; Jang, Mi Seon; Moon, Sunjin; Lee, Sang In; Jeon, Jun Ho; Baik, Jung Eun; Park, Ok-Jin; Son, Young Min; Kim, Gi Rak; Joo, Donghyun; Kim, Heebal; Han, Jae Yong; Yun, Cheol-Heui; Han, Seung Hyun International Immunopharmacology, vol.13 no.4, pp. 454-460	DOI
2014-03	Deleted copy number variation of Hanwoo and Holstein using next generation sequencing at the population level Shin, Dong-Hyun; Lee, Hyun-Jeong; Cho, Seoae; Kim, Hyeon Jeong; Hwang, Jae Yeon; Lee, Chang-Kyu; Jeong, JinYoung; Yoon, Duhak; Kim, Heebal BMC Genomics, 15(1):240	view file DOI
2015	Comprehensive Identification of Sexual Dimorphism-Associated Differentially Expressed Genes in Two-Way Factorial Designed RNA-Seq Data on Japanese Quail (Coturnix coturnix japonica) Caetano-Anolles, Kelsey; Seo, Minseok; Rodriguez-Zas, Sandra; Oh, Jae-Don; Han, Jae Yong; Lee, Kichoon; Park, Tae Sub; Shin, Sangsu; Jiao, Zhang Jiao; Ghosh, Mrinmoy; Jeong, Dong Kee; Cho, Seoae; Kim, Heebal; Song, Ki-Duk; Lee, Hak-Kyo PLoS ONE, vol.10 no.9, e0139324	view file DOI
2015-02	A genome-wide scan for signatures of directional selection in domesticated pigs Moon, Sunjin; Kim, Tae-Hun; Lee, Kyung-Tai; Kwak, Woori; Lee, Taeheon; Lee, Si-Woo; Kim, Myung-Jick; Cho, Kyuho; Kim, Namshin; Chung, Won-Hyong; Sung, Samsun; Park, Taesung; Cho, Seoae; Groenen, Martien AM; Nielsen, Rasmus; Kim, Yuseob; Kim, Heebal BMC Genomics, 16(1):130	view file DOI
2015-03	Coordinated international action to accelerate genome-to-phenome with FAANG, the Functional Annotation of Animal Genomes project Andersson, Leif; Archibald, Alan L; Bottema, Cynthia D; Brauning, Rudiger; Burgess, Shane C; Burt, Dave W; Casas, Eduardo; Cheng, Hans H; Clarke, Laura; Couldrey, Christine; Dalrymple, Brian P; Elsik, Christine G; Foissac, Sylvain; Giuffra, Elisabetta; Groenen, Martien A; Hayes, Ben J; Huang, LuSheng S; Khatib, Hassan; Kijas, James W; Kim, Heebal; Lunney, Joan K; McCarthy, Fiona M; McEwan, John C; Moore, Stephen; Nanduri, Bindu; Notredame, Cedric; Palti, Yniv; Plastow, Graham S; Reecy, James M; Rohrer, Gary A; Sarropoulou, Elena; Schmidt, Carl J; Silverstein, Jeffrey; Tellam, Ross L; Tixier-Boichard, Michele; Tosser-Klopp, Gwenola; Tuggle, Christopher K; Vilkki, Johanna; White, Stephen N; Zhao, Shuhong; Zhou, Huaijun Genome Biology, 16(1):57	view file
2015-08	Exploring evidence of positive selection reveals genetic basis of meat quality traits in Berkshire pigs through whole genome sequencing Jeong, Hyeonsoo; Song, Ki-Duk; Seo, Minseok; Caetano-Anollés, Kelsey; Kim, Jaemin; Kwak, Woori; Oh, Jae-don; Kim, EuiSoo; Jeong, Dong Kee; Cho, Seoae; Kim, Heebal; Lee, Hak-Kyo BMC Genetics, 16(1):104	view file DOI
2015-11	Complete genome sequence of Bacillus cereus FORC_005, a food-borne pathogen from the soy sauce braised fish-cake with quail-egg Lee, Dong-Hoon; Kim, Hye Rim; Chung, Han Young; Lim, Jong Gyu; Kim, Suyeon; Kim, Se Keun; Ku, Hye-Jin; Kim, Heebal; Ryu, Sangryeol; Choi, Sang Ho; Lee, Ju-Hoon Standards in Genomic Sciences, 10(1):97	view file DOI
2016-01	The prediction of the expected current selection coefficient of single nucleotide polymorphism associated with holstein milk yield, fat and protein contents Lee, Young-Sup; Shin, Donghyun; Lee, Wonseok; Taye, Mengistie; Cho, Kwanghyun; Park, Kyoung-Do; Kim, Heebal ASIAN-AUSTRALASIAN JOURNAL OF ANIMAL SCIENCES, Vol.29 No.1, pp.36-42	DOI
2016-01	Comprehensive identification of sexually dimorphic genes in diverse cattle tissues using RNA-seq Seo, Minseok; Caetano-Anolles, Kelsey; Rodriguez-Zas, Sandra; Ka, Sojeong; Jeong, Jin Young; Park, Sungkwon; Kim, Min Ji; Nho, Whan-Gook; Cho, Seoae; Kim, Heebal; Lee, Hyun-Jeong BMC Genomics, 17(1):81	view file DOI
2016-06	Complete genome sequence of Vibrio vulnificus FORC_017 isolated from a patient with a hemorrhagic rash after consuming raw dotted gizzard shad Chung, Han Young; Kim, You-Tae; Kim, Suyeon; Na, Eun Jung; Ku, Hye-Jin; Lee, Keun Hwa; Heo, Sang Taek; Ryu, Sangryeol; Kim, Heebal; Choi, Sang Ho; Lee, Ju-Hoon Gut Pathogens, Vol.8, p. 22	DOI
2016-06	Complete genome sequence of Vibrio vulnificus FORC_017 isolated from a patient with a hemorrhagic rash after consuming raw dotted gizzard shad Chung, Han Young; Kim, You-Tae; Kim, Suyeon; Na, Eun Jung; Ku, Hye-Jin; Lee, Keun Hwa; Heo, Sang Taek; Ryu, Sangryeol; Kim, Heebal; Choi, Sang Ho; Lee, Ju-Hoon Gut Pathogens, 8(1):22	view file DOI
2016-11	Complete genome of Vibrio parahaemolyticus FORC014 isolated from the toothfish Ahn, Sojin; Chung, Han Young; Lim, Sooyeon; Kim, Kwondo; Kim, Suyeon; Na, Eun Jung; Caetano-Anolles, Kelsey; Lee, Ju-Hoon; Ryu, Sangryeol; Choi, Sang Ho; Kim, Heebal Gut Pathogens, 8(1):59	view file DOI
2017-05	Cattle genome-wide analysis reveals genetic signatures in trypanotolerant NDama Kim, Soo-Jin; Ka, Sojeong; Ha, Jung-Woo; Kim, Jaemin; Yoo, DongAhn; Kim, Kwondo; Lee, Hak-Kyo; Lim, Dajeong; Cho, Seoae; Hanotte, Olivier; Mwai, Okeyo Ally; Dessie, Tadelle; Kemp, Stephen; Oh, Sung Jong; Kim, Heebal BMC Genomics, 18(1):371	view file link
2017-05	Comparative genomic analysis reveals genetic features related to the virulence of Bacillus cereus FORC_013 Koo, Hyun-Jin; Ahn, Sojin; Chung, Han Young; Kim, Suyeon; Kim, Kwondo; Ryu, Sangryeol; Lee, Ju-Hoon; Choi, Sang Ho; Kim, Heebal Gut Pathogens, 9(1):29	view file link
2018-05	Genome sequencing and protein domain annotations of Korean Hanwoo cattle identify Hanwoo-specific immunity-related and other novel genes Caetano-Anolles, Kelsey; Kim, Kwondo; Kwak, Woori; Sung, Samsun; Kim, Heebal; Choi, Bong-Hwan; Lim, Dajeong BMC Genetics, 19(1):37	view file DOI
2019-01	Sensitivity and specificity evaluation of multiple neurodegenerative proteins for Creutzfeldt-Jakob disease diagnosis using a deep-learning approach Lee, Sol Moe; Hyeon, Jae Wook; Kim, Soo-Jin; Kim, Heebal; Noh, Ran; Kim, Seonghan; Lee, Yeong Seon; Kim, Su Yeon Prion, Vol.13 No.1, pp.141-150	DOI
2019-01	Comparative genomic analysis of Lactobacillus mucosae LM1 identifies potential niche-specific genes and pathways for gastrointestinal adaptation Valeriano, Valerie Diane V.; Oh, Ju Kyoung; Bagon, Bernadette B.; Kim, Heebal; Kang, Dae-Kyung Genomics, Vol.111 No.1, pp.24-33	DOI
2019-06	De novo emergence and potential function of human-specific tandem repeats in brain-related loci Kim, Kwondo; Bang, Sohyun; Yoo, DongAhn; Kim, Heebal; Suzuki, Shunsuke Human Genetics, Vol.138 No.6, pp.661-672	DOI
2019-07	Establishment and evaluation of prediction model for multiple disease classification based on gut microbial data Bang, Sohyun; Yoo, DongAhn; Kim, Soo-Jin; Jhang, Soyun; Cho, Seoae; Kim, Heebal Scientific Reports, Vol.9 No.1, p. 10189	DOI
2019-08	Bayesian evolutionary hypernetworks for interpretable learning from high-dimensional data Kim, Soo-Jin; Ha, Jung-Woo; Kim, Heebal; Zhang, Byoung-Tak Applied Soft Computing Journal, Vol.81, p. 105477	DOI
2019-08	Expression and Purification of Extracellular Solute-Binding Protein (ESBP) in Escherichia coli, the Extracellular Protein Derived from Bifidobacterium longum KACC 91563 Song, Minyu; Kim, Hyaekang; Kwak, Woori; Park, Won Seo; Yoo, Jayeon; Kang, Han Byul; Kim, Jin-Hyoung; Kang, Sun-Moon; Ba, Hoa Van; Kim, Bu-Min; Oh, Mi-Hwa; Kim, Heebal; Ham, Jun-Sang Food Science of Animal Resources, Vol.39 No.4, pp.601-609	DOI
2019-08	Accurate and Strict Identification of Probiotic Species Based on Coverage of Whole-Metagenome Shotgun Sequencing Data Seol, Donghyeok; Jhang, So Yun; Kim, Hyaekang; Kim, Se-Young; Kwak, Hyo-Sun; Kim, Soon Han; Lee, Woojung; Park, Sewook; Kim, Heebal; Cho, Seoae; Kwak, Woori Frontiers in Microbiology, Vol.10, pp.1683-12	DOI
2019-11	Comprehensive genome and transcriptome analyses reveal genetic relationship, selection signature, and transcriptome landscape of small-sized Korean native Jeju horse Srikanth, Krishnamoorthy; Kim, Nam-Young; Park, WonCheoul; Kim, Jae-Min; Kim, Kwon-Do; Lee, Kyung-Tai; Son, Ju-Hwan; Chai, Han-Ha; Choi, Jung-Woo; Jang, Gul-Won; Kim, Heebal; Ryu, Youn-Chul; Nam, Jin-Wu; Park, Jong-Eun; Kim, Jun-Mo; Lim, Dajeong Scientific Reports, Vol.9, p. 16672	DOI
2020-10	The mosaic genome of indigenous African cattle as a unique genetic resource for African pastoralism Kim, Kwondo; Kwon, Taehyung; Dessie, Tadelle; Yoo, DongAhn; Mwai, Okeyo Ally; Jang, Jisung; Sung, Samsun; Lee, SaetByeol; Salim, Bashir; Jung, Jaehoon; Jeong, Heesu; Tarekegn, Getinet Mekuriaw; Tijjani, Abdulfatai; Lim, Dajeong; Cho, Seoae; Oh, Sung Jong; Lee, Hak-Kyo; Kim, Jaemin; Jeong, Choongwon; Kemp, Stephen; Hanotte, Olivier; Kim, Heebal Nature Genetics, Vol.52 No.10, pp.1099-1110	DOI
2021-07	Population differentiated copy number variation of Bos taurus, Bos indicus and their African hybrids Jang, Jisung; Kim, Kwondo; Lee, Young Ho; Kim, Heebal BMC Genomics. 2021 Jul 12;22(1):531	view file DOI
2021-08	The transcriptomic blueprint of molt in rooster using various tissues from Ginkkoridak (Korean long-tailed chicken) Charton, Clémentine; Youm, Dong-Jae; Ko, Byung June; Seol, Donghyeok; Kim, Bongsang; Chai, Han-Ha; Lim, Dajeong; Kim, Heebal BMC Genomics. 2021 Aug 05;22(1):594	view file DOI
2022-01	Mitonuclear incompatibility as a hidden driver behind the genome ancestry of African admixed cattle Kwon, Taehyung; Kim, Kwondo; Caetano-Anolles, Kelsey; Sung, Samsun; Cho, Seoae; Jeong, Choongwon; Hanotte, Olivier; Kim, Heebal BMC Biology, Vol.20 No.1, p. 20	DOI
2022-01	Chicken blastoderms and primordial germ cells possess a higher expression of DNA repair genes and lower expression of apoptosis genes to preserve their genome stability Rengaraj, Deivendran; Won, Sohyoung; Jung, Kyung Min; Woo, Seung Je; Lee, Haerang; Kim, Young Min; Kim, Heebal; Han, Jae Yong Scientific Reports, Vol.12 No.1, p. 49	DOI
2022-01	Mitonuclear incompatibility as a hidden driver behind the genome ancestry of African admixed cattle Kwon, Taehyung; Kim, Kwondo; Caetano-Anolles, Kelsey; Sung, Samsun; Cho, Seoae; Jeong, Choongwon; Hanotte, Olivier; Kim, Heebal BMC Biology. 2022 Jan 17;20(1):20	view file link
2022-03	Author Correction: Mitonuclear incompatibility as a hidden driver behind the genome ancestry of African admixed cattle Kwon, Taehyung; Kim, Kwondo; Caetano-Anolles, Kelsey; Sung, Samsun; Cho, Seoae; Jeong, Choongwon; Hanotte, Olivier; Kim, Heebal BMC Biology. 2022 Mar 09;20(1):62	view file link
2022-03	Correction to: Population differentiated copy number variation of Bos taurus, Bos indicus and their African hybrids Jang, Jisung; Terefe, Endashaw; Kim, Kwondo; Lee, Young H.; Belay, Gurja; Tijjani, Abdulfatai; Han, Jian-Lin; Hanotte, Olivier; Kim, Heebal BMC Genomics. 2022 Mar 15;23(1):207	view file link
2022-05	National genomic evaluation of Korean thoroughbreds through indirect racing phenotype Lee, Jinwoo; Shin, Donghyun; Kim, Heebal Animal Bioscience, Vol.35 No.5, pp.659-669	DOI
2022-08	Investigation of memory-enhancing effects of Streptococcus thermophilus EG007 in mice and elucidating molecular and metagenomic characteristics using nanopore sequencing Kim, Hyaekang; Jeon, Soomin; Kim, Jina; Seol, Donghyeok; Jo, JinChul; Cho, Seoae; Kim, Heebal Scientific Reports, Vol.12 No.1, p. 13274	DOI
2022-09	False gene and chromosome losses in genome assemblies caused by GC content variation and repeats Kim, Juwan; Lee, Chul; Ko, Byung June; Yoo, Dong Ahn; Won, Sohyoung; Phillippy, Adam M.; Fedrigo, Olivier; Zhang, Guojie; Howe, Kerstin; Wood, Jonathan; Durbin, Richard; Formenti, Giulio; Brown, Samara; Cantin, Lindsey; Mello, Claudio V.; Cho, Seoae; Rhie, Arang; Kim, Heebal; Jarvis, Erich D. Genome Biology, Vol.23 No.1, p. 204	DOI
2022-09	Widespread false gene gains caused by duplication errors in genome assemblies Ko, Byung June; Lee, Chul; Kim, Juwan; Rhie, Arang; Yoo, Dong Ahn; Howe, Kerstin; Wood, Jonathan; Cho, Seoae; Brown, Samara; Formenti, Giulio; Jarvis, Erich D.; Kim, Heebal Genome Biology, Vol.23 No.1, p. 205	DOI
2022-09	False gene and chromosome losses in genome assemblies caused by GC content variation and repeats Kim, Juwan; Lee, Chul; Ko, Byung J.; Yoo, Dong A.; Won, Sohyoung; Phillippy, Adam M.; Fedrigo, Olivier; Zhang, Guojie; Howe, Kerstin; Wood, Jonathan; Durbin, Richard; Formenti, Giulio; Brown, Samara; Cantin, Lindsey; Mello, Claudio V.; Cho, Seoae; Rhie, Arang; Kim, Heebal; Jarvis, Erich D. Genome Biology. 2022 Sep 27;23(1):204	view file link
2022-09	Widespread false gene gains caused by duplication errors in genome assemblies Ko, Byung J.; Lee, Chul; Kim, Juwan; Rhie, Arang; Yoo, Dong A.; Howe, Kerstin; Wood, Jonathan; Cho, Seoae; Brown, Samara; Formenti, Giulio; Jarvis, Erich D.; Kim, Heebal Genome Biology. 2022 Sep 27;23(1):205	view file link
2023-03	The idiosyncratic genome of Korean long-tailed chicken as a valuable genetic resource Youm, Dong-Jae; Ko, Byung June; Kim, Donghee; Park, Myeongkyu; Won, Sohyoung; Lee, Young Ho; Kim, Bongsang; Seol, Donghyeok; Chai, Han-Ha; Lim, Dajeong; Jeong, Choongwon; Kim, Heebal iScience, Vol.26 No.3, p. 106236	DOI
2023-12	Inference of Admixture Origins in Indigenous African Cattle Kim, Kwondo; Kim, Donghee; Hanotte, Olivier; Lee, Charles; Kim, Heebal; Jeong, Choongwon Molecular Biology and Evolution, Vol.40 No.12, p. 257	DOI